Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0667.Seq
(439 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.9
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 2.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 4.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 4.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 4.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 4.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 4.5
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 21 4.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 5.9
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 5.9
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 5.9
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 7.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.9
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 1.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 261 VSNPCRIRLGWLRPXRRSGIIPR 193
VS+P + + WL P +GII +
Sbjct: 1224 VSSPQALFISWLPPLEPNGIITK 1246
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 1.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 261 VSNPCRIRLGWLRPXRRSGIIPR 193
VS+P + + WL P +GII +
Sbjct: 1220 VSSPQALFISWLPPLEPNGIITK 1242
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 2.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 182 RTTGRSAECMNQMSETAVPLVLSS 111
+ G+ +C N MSE V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASL 236
ALGR AGG S+ L L+ +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASL 236
ALGR AGG S+ L L+ +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASL 236
ALGR AGG S+ L L+ +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASL 236
ALGR AGG S+ L L+ +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -2
Query: 309 LVKSHCLEPPDSRGSTVSNPCRIRLGWLRP 220
++ +C+ P ST+ +P R +L +P
Sbjct: 790 MIPVYCVPVPQVNDSTILSPVREKLSSSQP 819
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 296 CDFTSRRFAFKTRDATSKPIWIRG 367
C+F +RR+ K T K + RG
Sbjct: 38 CEFCNRRYRTKNSLTTHKSLQHRG 61
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 5.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 41 FCFECCPS 64
FC +CCPS
Sbjct: 352 FCPDCCPS 359
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 5.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 41 FCFECCPS 64
FC +CCPS
Sbjct: 352 FCPDCCPS 359
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.0 bits (42), Expect = 5.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 41 FCFECCPS 64
FC +CCPS
Sbjct: 352 FCPDCCPS 359
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 207 GIIPRMVASHHRPLGRVHEPNVR 139
G I ++AS HR L NVR
Sbjct: 219 GRISCVIASRHRNLEATESENVR 241
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 7.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 135 SFGHLVHALGRAAGGAKLPSAG 200
S LV A+ AGG PSAG
Sbjct: 393 SMSALVSAVRSPAGGQLPPSAG 414
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,642
Number of Sequences: 438
Number of extensions: 1861
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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