Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0666.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012999-1|AAH12999.1|  890|Homo sapiens kinesin family member 2...    30   3.9  
AF153329-1|AAD37806.1|  890|Homo sapiens RAB6KIFL protein.             30   3.9  
AF070672-1|AAC83230.1|  890|Homo sapiens rabkinesin6 protein.          30   3.9  

>BC012999-1|AAH12999.1|  890|Homo sapiens kinesin family member 20A
           protein.
          Length = 890

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 318 TIKEMKRKELEACQWSIYCRRIAQSGKKHKI 226
           T+KEM +  L+   W IY   +  SGK H I
Sbjct: 140 TVKEMVKDVLKGQNWLIYTYGVTNSGKTHTI 170


>AF153329-1|AAD37806.1|  890|Homo sapiens RAB6KIFL protein.
          Length = 890

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 318 TIKEMKRKELEACQWSIYCRRIAQSGKKHKI 226
           T+KEM +  L+   W IY   +  SGK H I
Sbjct: 140 TVKEMVKDVLKGQNWLIYTYGVTNSGKTHTI 170


>AF070672-1|AAC83230.1|  890|Homo sapiens rabkinesin6 protein.
          Length = 890

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 318 TIKEMKRKELEACQWSIYCRRIAQSGKKHKI 226
           T+KEM +  L+   W IY   +  SGK H I
Sbjct: 140 TVKEMVKDVLKGQNWLIYTYGVTNSGKTHTI 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,485,267
Number of Sequences: 237096
Number of extensions: 512188
Number of successful extensions: 970
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)