Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0660.Seq
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   5.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   5.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   9.4  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 240 PSCQNFDPAKAYSCP 196
           P C+N + A  ++CP
Sbjct: 144 PECKNEEVAGGFTCP 158


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 240 PSCQNFDPAKAYSCP 196
           P C+N + A  ++CP
Sbjct: 144 PECKNEEVAGGFTCP 158


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 281 SADAGVQSWLAKSIHHARILI 219
           S D+ VQSWL+     +++ +
Sbjct: 224 SVDSSVQSWLSGGASASKVTL 244


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 234 CQNFDPAKAYSCPQASCE 181
           C+N  P     C +A+CE
Sbjct: 878 CENGKPTCWRECDKATCE 895


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -2

Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGWRSPSIMPE 227
           +D+V  ++    L  R     F A W   +I+P+
Sbjct: 454 MDHVFAIREAATLNLRKLVDQFGAEWAETTIIPK 487


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,456
Number of Sequences: 336
Number of extensions: 2088
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)