Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0660.Seq
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 126 3e-29
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 122 4e-28
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 120 2e-27
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 100 3e-21
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 35 0.15
AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 31 2.4
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 126 bits (304), Expect = 3e-29
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 114 bits (274), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 122 bits (295), Expect = 4e-28
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 107 bits (258), Expect = 1e-23
Identities = 53/65 (81%), Positives = 58/65 (89%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDQKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 120 bits (290), Expect = 2e-27
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRPGRVKRKN
Sbjct: 119 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNA 178
Query: 74 RKGQ 63
+KGQ
Sbjct: 179 KKGQ 182
Score = 113 bits (272), Expect = 3e-25
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K P+RLFEGNAL RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQ
Sbjct: 54 RKAARELLTLDEKDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQ 113
Query: 268 VFKAG 254
VFK G
Sbjct: 114 VFKLG 118
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 100 bits (239), Expect = 3e-21
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 105
LAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 58 LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
Score = 96.3 bits (229), Expect = 4e-20
Identities = 45/54 (83%), Positives = 50/54 (92%)
Frame = -2
Query: 415 KKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 254
++ P+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK G
Sbjct: 4 REDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLG 57
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 34.7 bits (76), Expect = 0.15
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFE 389
RKAARE LTL++K P+RLFE
Sbjct: 45 RKAARELLTLDEKDPRRLFE 64
>AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ46249 fis, clone TESTI4021377. ).
Length = 222
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 207 YSCPQASCEHPIIYCAPGLWQAH*LLSEISIRWRSSWTCQ 88
+SCP A P+ + PG W +S W +W CQ
Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQ 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,055,093
Number of Sequences: 237096
Number of extensions: 1337017
Number of successful extensions: 3070
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3070
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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