Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0660.Seq
(449 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 128 4e-30
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 128 4e-30
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 112 2e-25
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 112 2e-25
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 78 6e-15
AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p pro... 29 2.9
AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA... 29 2.9
AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB... 29 2.9
AY058781-1|AAL14010.1| 585|Drosophila melanogaster SD07191p pro... 28 5.0
AE014296-3712|AAF51856.1| 585|Drosophila melanogaster CG11238-P... 28 5.0
AY094729-1|AAM11082.1| 723|Drosophila melanogaster GH24458p pro... 28 6.7
BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p pro... 27 8.8
AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-P... 27 8.8
AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-P... 27 8.8
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 128 bits (308), Expect = 4e-30
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL
Sbjct: 120 LAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNL 179
Query: 74 RKGQ 63
+K Q
Sbjct: 180 KKNQ 183
Score = 112 bits (269), Expect = 2e-25
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQ
Sbjct: 55 RKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQ 114
Query: 268 VFKAG 254
VFK G
Sbjct: 115 VFKLG 119
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 128 bits (308), Expect = 4e-30
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 75
LAKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL
Sbjct: 120 LAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNL 179
Query: 74 RKGQ 63
+K Q
Sbjct: 180 KKNQ 183
Score = 112 bits (269), Expect = 2e-25
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQ
Sbjct: 55 RKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQ 114
Query: 268 VFKAG 254
VFK G
Sbjct: 115 VFKLG 119
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 112 bits (269), Expect = 2e-25
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQ
Sbjct: 55 RKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQ 114
Query: 268 VFKAG 254
VFK G
Sbjct: 115 VFKLG 119
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIR 201
LAKSIHHAR+LIRQRHIR
Sbjct: 120 LAKSIHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 112 bits (269), Expect = 2e-25
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQ 269
RKAARE LTL++K KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQ
Sbjct: 55 RKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQ 114
Query: 268 VFKAG 254
VFK G
Sbjct: 115 VFKLG 119
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1
Query: 254 LAKSIHHARILIRQRHIR 201
LAKSIHHAR+LIRQRHIR
Sbjct: 120 LAKSIHHARVLIRQRHIR 137
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 77.8 bits (183), Expect = 6e-15
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = -1
Query: 332 ETRLCAWSED*GLLGASSADAGVQSWLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLD 153
E RL A SED GLLGASSADAGVQ+ LAKSIHHAR+LIRQR + + IPSF+V
Sbjct: 92 EARLRAGSEDSGLLGASSADAGVQAGLAKSIHHARVLIRQRTFVLASRWSTIPSFVVTPG 151
Query: 152 SGKHI-DFSLKSPFGGGRPGRVKRK 81
+ +FSLK P RP R +++
Sbjct: 152 LPEATSNFSLKMPL-RTRPSRSRQE 175
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = -2
Query: 448 RKAAREXLTLEKKXPKRLFEGNALXRRLVRIGVL 347
RK ARE LTL++K KRLF+G +L RRLVRIGVL
Sbjct: 54 RKVARELLTLDEKDAKRLFQGKSLVRRLVRIGVL 87
>AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p
protein.
Length = 891
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 212 FAGSKFWHDGWTSPASFEHLRLQTTLQEV 298
F G++ W GW A EH + Q L+EV
Sbjct: 767 FTGARCWTTGWGKDAFGEHGKYQNILKEV 795
>AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA,
isoform A protein.
Length = 891
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 212 FAGSKFWHDGWTSPASFEHLRLQTTLQEV 298
F G++ W GW A EH + Q L+EV
Sbjct: 767 FTGARCWTTGWGKDAFGEHGKYQNILKEV 795
>AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB,
isoform B protein.
Length = 1185
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 212 FAGSKFWHDGWTSPASFEHLRLQTTLQEV 298
F G++ W GW A EH + Q L+EV
Sbjct: 1061 FTGARCWTTGWGKDAFGEHGKYQNILKEV 1089
>AY058781-1|AAL14010.1| 585|Drosophila melanogaster SD07191p
protein.
Length = 585
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 263 EHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSNTNQ 367
E+ RLQ LQE LNLQT+ EF +Q S T++
Sbjct: 423 ENERLQRELQEARAELNLQTRRASEFEQQLLQLSETSR 460
>AE014296-3712|AAF51856.1| 585|Drosophila melanogaster CG11238-PA
protein.
Length = 585
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 263 EHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSNTNQ 367
E+ RLQ LQE LNLQT+ EF +Q S T++
Sbjct: 423 ENERLQRELQEARAELNLQTRRASEFEQQLLQLSETSR 460
>AY094729-1|AAM11082.1| 723|Drosophila melanogaster GH24458p
protein.
Length = 723
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 295 SPQSSDQAHNRVSSVFHPVLQYEPDDVXGHYLRTIS 402
SP S N S HP+ ++ P V H +T+S
Sbjct: 299 SPASDSYDSNSPSVAAHPIRKFNPGTVYTHVYKTVS 334
>BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p
protein.
Length = 511
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 194 CGHEYAFAGSKFWHDGWTSPASFEHLR 274
CGHE+ FA + WH+ PAS L+
Sbjct: 251 CGHEFCFACGENWHE----PASCSSLK 273
>AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-PB,
isoform B protein.
Length = 511
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 194 CGHEYAFAGSKFWHDGWTSPASFEHLR 274
CGHE+ FA + WH+ PAS L+
Sbjct: 251 CGHEFCFACGENWHE----PASCSSLK 273
>AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-PA,
isoform A protein.
Length = 511
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 194 CGHEYAFAGSKFWHDGWTSPASFEHLR 274
CGHE+ FA + WH+ PAS L+
Sbjct: 251 CGHEFCFACGENWHE----PASCSSLK 273
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,514,533
Number of Sequences: 53049
Number of extensions: 402411
Number of successful extensions: 1108
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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