Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0659.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   5.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.6  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 392 LRIDHLQWVKINEVY 348
           L +DH +W K NE Y
Sbjct: 314 LLLDHFKWEKENEYY 328


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 358  LILTHWRWSILKIIKFTLGTLLRSAAGXP 444
            L ++HWR  + +    TLG L+    G P
Sbjct: 1490 LSVSHWRSKLDESEAATLGALMDDLGGQP 1518


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,460
Number of Sequences: 2352
Number of extensions: 8765
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)