Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0658.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   4.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   4.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   4.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   4.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 281 SNYELLLFSLT*CMAMNKCVVNVRKVWLLILD*RFK 174
           S  +LLLF +T  M     +V +  VW+  L  R K
Sbjct: 710 SETKLLLFKITSVMIAVSGLVYIATVWICTLMNRCK 745


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 325 RHQNRHGGREIFDCCVCS 378
           RH   H G + F C +C+
Sbjct: 364 RHLRTHTGEKRFACPICN 381


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 201 PHFTNIDYTFIHGHTLSE 254
           PH++N  Y   +G+T SE
Sbjct: 37  PHYSNYHYEDPYGYTGSE 54


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 313 HGRSRHQNRHGGREIFDCCVC 375
           H    H+  H G + F+C  C
Sbjct: 148 HVLQNHERTHTGEKPFECQEC 168


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 201 PHFTNIDYTFIHGHTLSE 254
           PH++N  Y   +G+T SE
Sbjct: 37  PHYSNYHYEDPYGYTGSE 54


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 201 PHFTNIDYTFIHGHTLSE 254
           PH++N  Y   +G+T SE
Sbjct: 37  PHYSNYHYEDPYGYTGSE 54


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 168 RTFKTLIQNK*PHFTNIDYTFIH 236
           R   T +Q     F N+D+TF H
Sbjct: 378 RLLNTKLQFTAKDFFNLDWTFCH 400


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 168 RTFKTLIQNK*PHFTNIDYTFIH 236
           R   T +Q     F N+D+TF H
Sbjct: 334 RLLNTKLQFTAKDFFNLDWTFCH 356


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 356 ISLPPWRF*CLLRPC 312
           I   PWR  C+  PC
Sbjct: 329 IDQQPWRSYCIQPPC 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,224
Number of Sequences: 336
Number of extensions: 2119
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)