Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0658.Seq
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   1.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.1  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 409 ILTLFRLEHGHYKHSN 362
           ILTL + E  HY+H N
Sbjct: 270 ILTLGKKEFSHYEHQN 285


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1

Query: 388 EHGHYKHSNQRSLFHHGDSDVYYAR 314
           ++G+  H+NQR+++     ++ Y R
Sbjct: 663 KYGYVSHANQRNMYKLDLKNMKYTR 687


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 410 YSNII*IRTWSLQTQQSKISLPPWRF*CLLRP 315
           Y   I +   S   + + I  PP RF C +RP
Sbjct: 110 YCGNITLNIESTSNKMTVILTPPGRFFCEVRP 141


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 322 SRHQNRHGGREIFDCCVCS 378
           +RH   H G + + C  CS
Sbjct: 108 TRHYRTHTGEKPYQCEYCS 126



 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +1

Query: 325 RHQNRHGGREIFDCCVCS 378
           RH   H G     C VCS
Sbjct: 165 RHMRIHTGERPHKCTVCS 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,478
Number of Sequences: 438
Number of extensions: 2207
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)