Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0657.Seq
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase pr...    25   2.1  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   3.6  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   3.6  

>Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase
           protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 381 RHEVNTTLQKTVSCSHSLKLXTCERDS 461
           R E+   L+    C HS  + TCE DS
Sbjct: 128 RREMPEGLRDDQLCXHSATMDTCEGDS 154


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 372 YFFRHEV-NTTLQKTVSCSHSLKLXTCERDSC 464
           Y ++ EV N    +TV+C  + K   C++ +C
Sbjct: 226 YQYKEEVFNPNNAQTVACLQNQKKLACKKSTC 257


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 372 YFFRHEV-NTTLQKTVSCSHSLKLXTCERDSC 464
           Y ++ EV N    +TV+C  + K   C++ +C
Sbjct: 226 YQYKEEVFNPNNAQTVACLQNQKKLACKKSTC 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,375
Number of Sequences: 2352
Number of extensions: 7452
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)