Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0656.Seq
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    77   2e-13
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    35   1.7  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   2.2  
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    33   3.9  
UniRef50_UPI00015559C4 Cluster: PREDICTED: similar to tudor doma...    32   8.9  
UniRef50_UPI0000DB7276 Cluster: PREDICTED: similar to citron iso...    32   8.9  
UniRef50_A0C6B7 Cluster: Chromosome undetermined scaffold_152, w...    32   8.9  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 77.4 bits (182), Expect = 2e-13
 Identities = 42/74 (56%), Positives = 46/74 (62%)
 Frame = +2

Query: 293 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVP 472
           G P AR  + TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV 
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 473 YRYFSSLPPRAGVG 514
           Y YFSSLPPR G G
Sbjct: 90  YCYFSSLPPRVGSG 103


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 208 RILILNRRFLERRLTEICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 369
           R++   ++F            V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 142 RVMSFQKKFKSPEFAAQYDRPVNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 367 SWNYRGCWHQTCP 405
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +1

Query: 457 PRKSPVSLFFVTTSPCR 507
           PRKSPV LFFVTTSP R
Sbjct: 24  PRKSPVLLFFVTTSPGR 40


>UniRef50_UPI00015559C4 Cluster: PREDICTED: similar to tudor domain
           containing 7, partial; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to tudor domain
           containing 7, partial - Ornithorhynchus anatinus
          Length = 439

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +1

Query: 178 TSTLTEEHRDRILILNRRFLERRLTEICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSI 357
           +++LT E+    +++ +R  + R+  + S N+ V P +  TDS +     +L N N   I
Sbjct: 214 SASLTLENSSNTMVV-KRTQQGRMGHMVSKNIPVPPLVIPTDSCSPVLVVKLNNTNEVLI 272

Query: 358 RYWSWNY 378
           RY   NY
Sbjct: 273 RYIGKNY 279


>UniRef50_UPI0000DB7276 Cluster: PREDICTED: similar to citron
           isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar
           to citron isoform 2 - Apis mellifera
          Length = 1394

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 202 RDRILILNRRFLER--RLTEICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRY 363
           +++I  LN+    +  R+TE+C++N  +S R++ T+      N EL     F ++Y
Sbjct: 52  KEKITQLNKHIESQTVRITELCTSNNEMSSRLQRTECELQTANAELHKLRVFQMQY 107


>UniRef50_A0C6B7 Cluster: Chromosome undetermined scaffold_152,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_152,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1525

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +1

Query: 223 NRRFLERRLTEICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNYRG-CWHQT 399
           NR + E++ +  C+    +    +CTD +A +      N+N F   Y  + Y   CW   
Sbjct: 459 NRMYNEKQNSCFCAYG-KIELDGKCTDYSAFQLTISQVNKNEFKCSYGYFEYEDQCW--K 515

Query: 400 CPPIVPR*NI*SVLIPITRPR 462
           CP  + R N+ + +  IT P+
Sbjct: 516 CPSKI-RKNLITCIECITNPK 535


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,518,003
Number of Sequences: 1657284
Number of extensions: 11676299
Number of successful extensions: 25943
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25929
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)