Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0656.Seq
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124536-1|BAC85877.1|  170|Homo sapiens PTPRF), interacting pro...    31   4.1  
BC146779-1|AAI46780.1| 1669|Homo sapiens intersectin 2 protein.        30   7.2  
BC038963-1|AAH38963.1|  611|Homo sapiens Similar to intersectin ...    30   7.2  
BC020921-1|AAH20921.1|  560|Homo sapiens ITSN2 protein protein.        30   7.2  
AK021545-1|BAB13841.1|  436|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AF248540-1|AAF63600.1| 1681|Homo sapiens intersectin 2 protein.        30   7.2  
AF182199-1|AAF59904.1| 1248|Homo sapiens intersectin 2 short iso...    30   7.2  
AF182198-1|AAF59903.1| 1696|Homo sapiens intersectin 2 long isof...    30   7.2  
AC009228-1|AAX93122.1| 1329|Homo sapiens unknown protein.              30   7.2  
AB033082-1|BAA86570.1| 1676|Homo sapiens KIAA1256 protein protein.     30   7.2  

>AK124536-1|BAC85877.1|  170|Homo sapiens PTPRF), interacting
           protein (liprin), alpha 2  protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 244 RLTEICSANVSVSPRMRCTDSAAHKCNYELFNRNNF 351
           RL    S  +++ PR++C+ +    CN+EL   +NF
Sbjct: 3   RLLFFKSQGLALLPRLKCSGAIIAHCNFELLGSSNF 38


>BC146779-1|AAI46780.1| 1669|Homo sapiens intersectin 2 protein.
          Length = 1669

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 348 KMQEEEPQKKLPVTFEDKRKANY 370


>BC038963-1|AAH38963.1|  611|Homo sapiens Similar to intersectin 2
           protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 373 KMQEEEPQKKLPVTFEDKRKANY 395


>BC020921-1|AAH20921.1|  560|Homo sapiens ITSN2 protein protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 348 KMQEEEPQKKLPVTFEDKRKANY 370


>AK021545-1|BAB13841.1|  436|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11483 fis, clone HEMBA1001822, highly similar to
           Mus musculus Ese2L protein mRNA. ).
          Length = 436

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 91  KMQEEEPQKKLPVTFEDKRKANY 113


>AF248540-1|AAF63600.1| 1681|Homo sapiens intersectin 2 protein.
          Length = 1681

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 360 KMQEEEPQKKLPVTFEDKRKANY 382


>AF182199-1|AAF59904.1| 1248|Homo sapiens intersectin 2 short
           isoform protein.
          Length = 1248

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 348 KMQEEEPQKKLPVTFEDKRKANY 370


>AF182198-1|AAF59903.1| 1696|Homo sapiens intersectin 2 long isoform
           protein.
          Length = 1696

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 348 KMQEEEPQKKLPVTFEDKRKANY 370


>AC009228-1|AAX93122.1| 1329|Homo sapiens unknown protein.
          Length = 1329

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 348 KMQEEEPQKKLPVTFEDKRKANY 370


>AB033082-1|BAA86570.1| 1676|Homo sapiens KIAA1256 protein protein.
          Length = 1676

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 581 RFRKREPEKRLPTSXEGSRRANY 513
           + ++ EP+K+LP + E  R+ANY
Sbjct: 355 KMQEEEPQKKLPVTFEDKRKANY 377


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,740,956
Number of Sequences: 237096
Number of extensions: 1818610
Number of successful extensions: 3140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3140
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)