Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0656.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    29   3.6  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    29   3.6  
AE014297-3101|AAN13904.1|  713|Drosophila melanogaster CG31423-P...    28   8.4  

>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 340 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 441
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 340 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 441
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AE014297-3101|AAN13904.1|  713|Drosophila melanogaster CG31423-PA
           protein.
          Length = 713

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 308 ALSVHRI-RGDTDTFAEHISVSRRSKKRRFN 219
           A   HR+ R +   F  H +VSRRS+ +RF+
Sbjct: 6   AFQAHRLPRAENSFFTFHNAVSRRSRSKRFS 36


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,683,385
Number of Sequences: 53049
Number of extensions: 554960
Number of successful extensions: 1009
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)