Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0653.Seq
         (429 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8T7L8 Cluster: Seroin 1; n=1; Bombyx mori|Rep: Seroin ...   156   2e-37
UniRef50_Q8T7L7 Cluster: Seroin 2; n=1; Bombyx mori|Rep: Seroin ...    43   0.002
UniRef50_Q21M78 Cluster: PfkB; n=1; Saccharophagus degradans 2-4...    37   0.15 
UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...    35   0.62 
UniRef50_Q01AX9 Cluster: Putative transcription regulator CPL1; ...    32   5.8  
UniRef50_Q6KHN6 Cluster: CTP synthetase; n=6; Mycoplasma|Rep: CT...    31   7.7  

>UniRef50_Q8T7L8 Cluster: Seroin 1; n=1; Bombyx mori|Rep: Seroin 1 -
           Bombyx mori (Silk moth)
          Length = 108

 Score =  156 bits (378), Expect = 2e-37
 Identities = 75/92 (81%), Positives = 79/92 (85%)
 Frame = +1

Query: 1   VITLITIASAGFVWEDDDDLFPGFSDTFKMPEIPEIKSLEFDDIKTHVAGDNEQYTGEXX 180
           VITLITIASAGFVWEDDDDLFPGFSDTFKM EIPEIKSLEFDDIKTHVAGDNEQYTGE  
Sbjct: 9   VITLITIASAGFVWEDDDDLFPGFSDTFKMREIPEIKSLEFDDIKTHVAGDNEQYTGESK 68

Query: 181 XXXXXXXTVNGKTVSSGGVSELTNEEKPSKKR 276
                  TVNGKTVSSGGVSELTN+ K  +++
Sbjct: 69  SSYSSSSTVNGKTVSSGGVSELTNDGKAVEEK 100



 Score = 35.5 bits (78), Expect = 0.47
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 255 GKAVEEKVMEYKDGD 299
           GKAVEEKVMEYKDGD
Sbjct: 94  GKAVEEKVMEYKDGD 108


>UniRef50_Q8T7L7 Cluster: Seroin 2; n=1; Bombyx mori|Rep: Seroin 2 -
           Bombyx mori (Silk moth)
          Length = 112

 Score = 43.2 bits (97), Expect = 0.002
 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
 Frame = +1

Query: 1   VITLITIASAGFVWEDDDDLFPGF-SDTFKMPEIPEI 108
           +++LITIASAGFVW+DD+  FPGF SD +   +IP I
Sbjct: 9   MLSLITIASAGFVWQDDN--FPGFPSDMWPSIQIPTI 43


>UniRef50_Q21M78 Cluster: PfkB; n=1; Saccharophagus degradans
           2-40|Rep: PfkB - Saccharophagus degradans (strain 2-40 /
           ATCC 43961 / DSM 17024)
          Length = 318

 Score = 37.1 bits (82), Expect = 0.15
 Identities = 24/89 (26%), Positives = 35/89 (39%)
 Frame = +1

Query: 4   ITLITIASAGFVWEDDDDLFPGFSDTFKMPEIPEIKSLEFDDIKTHVAGDNEQYTGEXXX 183
           + L+T+     +W D DDL       ++  EI E+      D    V GD+EQ       
Sbjct: 195 LALLTLDDEALLWGDSDDLLADAQKRYQSLEISELVFKRGADDVIIVQGDSEQRVSVPKV 254

Query: 184 XXXXXXTVNGKTVSSGGVSELTNEEKPSK 270
                 T  G T ++G +S     E P K
Sbjct: 255 ENIIDTTAAGDTFNAGYLSARLKGEPPVK 283


>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score = 35.1 bits (77), Expect = 0.62
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 52  DDLFPGFSDTFKMPEIPEIKSLE-FDDIKTHVAGDNEQYTGEXXXXXXXXXTVNGKTVSS 228
           DD+ P  SD  K   +PE+K+ E   + K+    D E  + +           + KT   
Sbjct: 75  DDIAPEDSDIAKPETVPEVKTEEKVPEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQ 134

Query: 229 GGVSELTNEEKPS 267
             V+E++ EEKPS
Sbjct: 135 ATVAEISKEEKPS 147


>UniRef50_Q01AX9 Cluster: Putative transcription regulator CPL1;
           n=1; Ostreococcus tauri|Rep: Putative transcription
           regulator CPL1 - Ostreococcus tauri
          Length = 457

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 43  EDDDDLFPGFSDTFKMPEIPEIKSLEFDDIKTHVAGD 153
           ++DDD++    D  +  E+P +  L FD  +TH  GD
Sbjct: 11  DEDDDVYLSCEDELEDGELPRLVDLFFDSEETHEEGD 47


>UniRef50_Q6KHN6 Cluster: CTP synthetase; n=6; Mycoplasma|Rep: CTP
           synthetase - Mycoplasma mobile
          Length = 540

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 37  VWEDDDDLFPGFSDTFKMPEIPEIKSLEF 123
           +  DD+ +F GF+     PEI E+K+L+F
Sbjct: 476 ILSDDEFIFSGFNKKLNTPEICEVKNLDF 504


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,364,254
Number of Sequences: 1657284
Number of extensions: 5768800
Number of successful extensions: 15234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15228
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)