Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0652.Seq
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012814-1|AAH12814.1| 310|Homo sapiens zinc finger protein-lik... 120 2e-27
BC012530-1|AAH12530.1| 310|Homo sapiens zinc finger protein-lik... 120 2e-27
AF043611-1|AAD08644.1| 310|Homo sapiens zinc-finger protein MCG... 120 2e-27
AF030291-1|AAF21634.1| 310|Homo sapiens zinc-finger protein-lik... 120 2e-27
AF001891-1|AAB86533.1| 118|Homo sapiens unknown protein. 120 2e-27
BC060861-1|AAH60861.1| 580|Homo sapiens chromosome 3 open readi... 29 7.5
AK092147-1|BAC03816.1| 580|Homo sapiens protein ( Homo sapiens ... 29 7.5
AK027472-1|BAB55137.1| 438|Homo sapiens protein ( Homo sapiens ... 29 7.5
BC130474-1|AAI30475.1| 723|Homo sapiens tripartite motif-contai... 28 9.9
BC130472-1|AAI30473.1| 723|Homo sapiens tripartite motif-contai... 28 9.9
AL833848-1|CAD38707.1| 199|Homo sapiens hypothetical protein pr... 28 9.9
AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens ... 28 9.9
AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protei... 28 9.9
>BC012814-1|AAH12814.1| 310|Homo sapiens zinc finger protein-like 1
protein.
Length = 310
Score = 120 bits (289), Expect = 2e-27
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +1
Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
MGLCKCPKR+VTN FCFEH VNVCE+C+V NH KCI+QSYLQWL + P R
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
L CY +FHW+C + LPR T P
Sbjct: 61 ASRETTRLVCYDLFHWACLNERAAQLPRNTAP 92
>BC012530-1|AAH12530.1| 310|Homo sapiens zinc finger protein-like 1
protein.
Length = 310
Score = 120 bits (289), Expect = 2e-27
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +1
Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
MGLCKCPKR+VTN FCFEH VNVCE+C+V NH KCI+QSYLQWL + P R
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
L CY +FHW+C + LPR T P
Sbjct: 61 ASRETTRLVCYDLFHWACLNERAAQLPRNTAP 92
>AF043611-1|AAD08644.1| 310|Homo sapiens zinc-finger protein MCG4
protein.
Length = 310
Score = 120 bits (289), Expect = 2e-27
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +1
Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
MGLCKCPKR+VTN FCFEH VNVCE+C+V NH KCI+QSYLQWL + P R
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
L CY +FHW+C + LPR T P
Sbjct: 61 ASRETTRLVCYDLFHWACLNERAAQLPRNTAP 92
>AF030291-1|AAF21634.1| 310|Homo sapiens zinc-finger protein-like 1
protein.
Length = 310
Score = 120 bits (289), Expect = 2e-27
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +1
Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
MGLCKCPKR+VTN FCFEH VNVCE+C+V NH KCI+QSYLQWL + P R
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
L CY +FHW+C + LPR T P
Sbjct: 61 ASRETTRLVCYDLFHWACLNERAAQLPRNTAP 92
>AF001891-1|AAB86533.1| 118|Homo sapiens unknown protein.
Length = 118
Score = 120 bits (289), Expect = 2e-27
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +1
Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
MGLCKCPKR+VTN FCFEH VNVCE+C+V NH KCI+QSYLQWL + P R
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
L CY +FHW+C + LPR T P
Sbjct: 61 ASRETTRLVCYDLFHWACLNERAAQLPRNTAP 92
>BC060861-1|AAH60861.1| 580|Homo sapiens chromosome 3 open reading
frame 39 protein.
Length = 580
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 235 YLQWLXEVTTIPYVRFVQNH*MKENAYXLTCYHVF 339
+LQ E T +PY+ +QNH EN T Y V+
Sbjct: 525 WLQEQGENTYVPYILALQNHTFTENIKPFTTYLVW 559
>AK092147-1|BAC03816.1| 580|Homo sapiens protein ( Homo sapiens
cDNA FLJ34828 fis, clone NT2NE2009295. ).
Length = 580
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 235 YLQWLXEVTTIPYVRFVQNH*MKENAYXLTCYHVF 339
+LQ E T +PY+ +QNH EN T Y V+
Sbjct: 525 WLQEQGENTYVPYILALQNHTFTENIKPFTTYLVW 559
>AK027472-1|BAB55137.1| 438|Homo sapiens protein ( Homo sapiens
cDNA FLJ14566 fis, clone NT2RM4000324. ).
Length = 438
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 235 YLQWLXEVTTIPYVRFVQNH*MKENAYXLTCYHVF 339
+LQ E T +PY+ +QNH EN T Y V+
Sbjct: 383 WLQEQGENTYVPYILALQNHTFTENIKPFTTYLVW 417
>BC130474-1|AAI30475.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 124 LCK-CPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYL 240
LC+ C RR+ + C +N+C +C+ H +Q ++
Sbjct: 237 LCQVCRNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHV 276
>BC130472-1|AAI30473.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 124 LCK-CPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYL 240
LC+ C RR+ + C +N+C +C+ H +Q ++
Sbjct: 237 LCQVCRNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHV 276
>AL833848-1|CAD38707.1| 199|Homo sapiens hypothetical protein
protein.
Length = 199
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 124 LCK-CPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYL 240
LC+ C RR+ + C +N+C +C+ H +Q ++
Sbjct: 67 LCQVCRNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHV 106
>AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ40097 fis, clone TESTI2004169. ).
Length = 708
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 124 LCK-CPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYL 240
LC+ C RR+ + C +N+C +C+ H +Q ++
Sbjct: 237 LCQVCRNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHV 276
>AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protein
42 protein.
Length = 723
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 124 LCK-CPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYL 240
LC+ C RR+ + C +N+C +C+ H +Q ++
Sbjct: 237 LCQVCRNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHV 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,881,250
Number of Sequences: 237096
Number of extensions: 1106745
Number of successful extensions: 5785
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5780
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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