Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0652.Seq
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071252-1|AAL48874.1|  299|Drosophila melanogaster RE29207p pro...   125   2e-29
AE014297-3131|AAF55977.1|  299|Drosophila melanogaster CG5382-PB...   125   2e-29
AY060612-1|AAL28160.1|  321|Drosophila melanogaster GH03873p pro...    28   5.3  
AE014298-2619|AAN09596.1|  301|Drosophila melanogaster CG15814-P...    28   5.3  
AE014298-2618|AAN09595.1|  321|Drosophila melanogaster CG15814-P...    28   5.3  
AE014298-2617|AAN09594.1|  321|Drosophila melanogaster CG15814-P...    28   5.3  
AE014298-2616|AAF48770.1|  321|Drosophila melanogaster CG15814-P...    28   5.3  

>AY071252-1|AAL48874.1|  299|Drosophila melanogaster RE29207p
           protein.
          Length = 299

 Score =  125 bits (302), Expect = 2e-29
 Identities = 53/92 (57%), Positives = 61/92 (66%)
 Frame = +1

Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
           MGLCKCPKR VTNQFCFEH VNVCE+CMV +HPKCI+QSYLQWL +   I          
Sbjct: 1   MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCTLCGTTL 60

Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
            + +   L CYHVFHW C  ++  ALP  T P
Sbjct: 61  EQGDCVRLVCYHVFHWDCLNARQAALPANTAP 92


>AE014297-3131|AAF55977.1|  299|Drosophila melanogaster CG5382-PB
           protein.
          Length = 299

 Score =  125 bits (302), Expect = 2e-29
 Identities = 53/92 (57%), Positives = 61/92 (66%)
 Frame = +1

Query: 118 MGLCKCPKRRVTNQFCFEHXVNVCENCMVTNHPKCIIQSYLQWLXEVTTIPYVRFVQNH* 297
           MGLCKCPKR VTNQFCFEH VNVCE+CMV +HPKCI+QSYLQWL +   I          
Sbjct: 1   MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCTLCGTTL 60

Query: 298 MKENAYXLTCYHVFHWSCAESKXRALPRTTLP 393
            + +   L CYHVFHW C  ++  ALP  T P
Sbjct: 61  EQGDCVRLVCYHVFHWDCLNARQAALPANTAP 92


>AY060612-1|AAL28160.1|  321|Drosophila melanogaster GH03873p
           protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 304 ENAYXLTCYHVFHWSC 351
           EN Y L+C HVFH  C
Sbjct: 238 ENTYKLSCNHVFHEFC 253


>AE014298-2619|AAN09596.1|  301|Drosophila melanogaster CG15814-PD,
           isoform D protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 304 ENAYXLTCYHVFHWSC 351
           EN Y L+C HVFH  C
Sbjct: 218 ENTYKLSCNHVFHEFC 233


>AE014298-2618|AAN09595.1|  321|Drosophila melanogaster CG15814-PC,
           isoform C protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 304 ENAYXLTCYHVFHWSC 351
           EN Y L+C HVFH  C
Sbjct: 238 ENTYKLSCNHVFHEFC 253


>AE014298-2617|AAN09594.1|  321|Drosophila melanogaster CG15814-PB,
           isoform B protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 304 ENAYXLTCYHVFHWSC 351
           EN Y L+C HVFH  C
Sbjct: 238 ENTYKLSCNHVFHEFC 253


>AE014298-2616|AAF48770.1|  321|Drosophila melanogaster CG15814-PA,
           isoform A protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 304 ENAYXLTCYHVFHWSC 351
           EN Y L+C HVFH  C
Sbjct: 238 ENTYKLSCNHVFHEFC 253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,931,194
Number of Sequences: 53049
Number of extensions: 329028
Number of successful extensions: 936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)