Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0650.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001864-1|AAN71631.1|  550|Drosophila melanogaster RH70633p pro...    29   4.1  
AE014296-1969|AAF50052.1|  537|Drosophila melanogaster CG11711-P...    28   9.6  
AE014296-1968|AAN11874.2|  728|Drosophila melanogaster CG11711-P...    28   9.6  
AE014296-1967|AAF50051.1|  566|Drosophila melanogaster CG11711-P...    28   9.6  
AE014296-1966|AAN11873.1|  431|Drosophila melanogaster CG11711-P...    28   9.6  
BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p pro...    24   9.9  

>BT001864-1|AAN71631.1|  550|Drosophila melanogaster RH70633p
           protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 478 HNLDHHHHHCFITRVAIIXM 537
           HNL+HHHHH   T    I M
Sbjct: 506 HNLNHHHHHHHHTATMAIIM 525


>AE014296-1969|AAF50052.1|  537|Drosophila melanogaster CG11711-PB,
           isoform B protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 478 HNLDHHHHH 504
           HNL+HHHHH
Sbjct: 477 HNLNHHHHH 485


>AE014296-1968|AAN11874.2|  728|Drosophila melanogaster CG11711-PA,
           isoform A protein.
          Length = 728

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 478 HNLDHHHHH 504
           HNL+HHHHH
Sbjct: 668 HNLNHHHHH 676


>AE014296-1967|AAF50051.1|  566|Drosophila melanogaster CG11711-PD,
           isoform D protein.
          Length = 566

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 478 HNLDHHHHH 504
           HNL+HHHHH
Sbjct: 506 HNLNHHHHH 514


>AE014296-1966|AAN11873.1|  431|Drosophila melanogaster CG11711-PC,
           isoform C protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 478 HNLDHHHHH 504
           HNL+HHHHH
Sbjct: 371 HNLNHHHHH 379


>BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect(2) = 9.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 490 HHHHHC 507
           HHHHHC
Sbjct: 117 HHHHHC 122



 Score = 22.6 bits (46), Expect(2) = 9.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 487 DHHHHH 504
           DHHHHH
Sbjct: 97  DHHHHH 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,035,035
Number of Sequences: 53049
Number of extensions: 290900
Number of successful extensions: 2001
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)