Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0648.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 150 2e-36
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 150 2e-36
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 150 2e-36
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 150 2e-36
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 150 2e-36
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 150 2e-36
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 150 2e-36
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 145 7e-35
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 130 3e-30
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 1e-13
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 0.96
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 0.96
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 0.96
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 0.96
DQ100739-1|AAZ08746.1| 119|Homo sapiens immunoglobulin heavy ch... 29 6.8
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 75 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 134
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 135 GRPGFSIADKKRRTGCIGAKH 155
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 69 AVHCTVRGAKAEEIL 83
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 74 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 133
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 134 GRPGFSIADKKRRTGCIGAKH 154
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 68 AVHCTVRGAKAEEIL 82
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 74 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 133
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 134 GRPGFSIADKKRRTGCIGAKH 154
Score = 128 bits (309), Expect = 1e-29
Identities = 62/75 (82%), Positives = 65/75 (86%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 68 AVHCTVRGAKAEEIL 82
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 73 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 132
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 133 GRPGFSIADKKRRTGCIGAKH 153
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 67 AVHCTVRGAKAEEIL 81
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 75 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 134
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 135 GRPGFSIADKKRRTGCIGAKH 155
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 69 AVHCTVRGAKAEEIL 83
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 73 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 132
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 133 GRPGFSIADKKRRTGCIGAKH 153
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 67 AVHCTVRGAKAEEIL 81
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 150 bits (364), Expect = 2e-36
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 74 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 133
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 134 GRPGFSIADKKRRTGCIGAKH 154
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 68 AVHCTVRGAKAEEIL 82
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 145 bits (352), Expect = 7e-35
Identities = 65/81 (80%), Positives = 75/81 (92%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIYGLDFYVVL
Sbjct: 75 RGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGLDFYVVL 134
Query: 435 GRPGFNVAHRRRKTGKVGFPH 497
GRPGF++A ++R+TG +G H
Sbjct: 135 GRPGFSIADKKRRTGCIGAKH 155
Score = 125 bits (302), Expect = 7e-29
Identities = 61/75 (81%), Positives = 64/75 (85%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 238 AVHCTVEELKQKKSL 282
AVHC V K ++ L
Sbjct: 69 AVHCAVRGAKAEEIL 83
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 130 bits (314), Expect = 3e-30
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 238 AVHCTVEELKQKKSL 282
AVHCTV K ++ L
Sbjct: 67 AVHCTVRGAKAEEIL 81
Score = 120 bits (290), Expect = 2e-27
Identities = 55/59 (93%), Positives = 58/59 (98%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 431
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV
Sbjct: 73 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 1e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 82 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 189
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 52 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 213
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 52 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 213
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 52 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 213
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 52 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 213
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>DQ100739-1|AAZ08746.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 263 SSSTVQWTAIFSLRRIPKDRTVYLALENTGCCPVSCSNTLAARVSLSPDS 114
S ST + +R+ P R ++ NTG CS RVS++ DS
Sbjct: 21 SGSTFNANGLHWVRQAPGQRLEWVGWINTGNGNTRCSQNFQGRVSITKDS 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,153,278
Number of Sequences: 237096
Number of extensions: 1608210
Number of successful extensions: 10717
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10717
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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