Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0648.Seq
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   1.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   3.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.4  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 369  IDLGIKYDP-SIGIYGL--DFYVVLGRPGFNVAHRRRKTGKVG 488
            + +GI + P + G+ G     Y + G    NVA R   TGKVG
Sbjct: 894  LKMGINHGPVTAGVIGARKPHYDIWGNT-VNVASRMESTGKVG 935


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 267 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 362
           AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 386 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 417


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 267 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 362
           AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 301 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 332


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 267 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 362
           AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 620 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 651


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 173 SLYFPRLGIQCGLLVSVVMKRLLSIVQS 256
           SL+   LGI+CG  +  +++  L I Q+
Sbjct: 462 SLFRINLGIECGYEIKKLLRYKLLISQN 489


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 CGVTTSPPRVILASVFKN 366
           C +   PPRVIL+S  K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 CGVTTSPPRVILASVFKN 366
           C +   PPRVIL+S  K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 CGVTTSPPRVILASVFKN 366
           C +   PPRVIL+S  K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 499 RWGNPTFPVLRLLCATLKPGR 437
           RW  PT P   LL A    GR
Sbjct: 443 RWTTPTTPHSPLLVAPFGAGR 463


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/15 (33%), Positives = 9/15 (60%)
 Frame = -1

Query: 145 WRHESACHRIHQHRC 101
           W+  ++ H +H H C
Sbjct: 88  WQRLTSLHELHVHGC 102


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -1

Query: 499 RWGNPTFPVLR 467
           +WGNP  P+++
Sbjct: 841 KWGNPNRPIVQ 851


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,773
Number of Sequences: 438
Number of extensions: 3245
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)