Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0647.Seq
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   9.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 124 LPAREGGDHRQRPGQQDH 177
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 172 DHSVLCCVHRHRASHRRCRQEPGGDEPHNTIFDAKRLI 285
           DH  +  +H +  SH   +QEP G    N  F   RL+
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLL 376


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 123 TPTQEYVVPRSIPT 82
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 378 TLILGLPPSLTTSKGQC 328
           +L+LGL PS   + G+C
Sbjct: 17  SLLLGLYPSYLQTVGKC 33


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 89  FLLRVLLPFCIFNQSCYLFLKQ 24
           FL+ V L F +F     LF+K+
Sbjct: 139 FLIGVSLSFNLFGDLLTLFIKE 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,407
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)