Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0647.Seq
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 166 1e-42
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 163 2e-41
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 140 7e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 130 1e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 84 1e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 7e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 6e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.11
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.45
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 27 1.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 1.8
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 3.2
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 4.2
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 25 5.6
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 5.6
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 5.6
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 7.3
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 7.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 7.3
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 24 9.7
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 24 9.7
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 24 9.7
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 24 9.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 24 9.7
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 24 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 166 bits (404), Expect = 1e-42
Identities = 78/115 (67%), Positives = 89/115 (77%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 260 QYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
F+D VQ+DMKHWPF+V+S GKP ++V Y GE KTF PEE+S
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEIS 118
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 163 bits (395), Expect = 2e-41
Identities = 77/115 (66%), Positives = 87/115 (75%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 260 QYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
F D VQ+DMKHWPF+V+ GKP I+V + GE KTF PEE+S
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEIS 118
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 140 bits (340), Expect = 7e-35
Identities = 66/115 (57%), Positives = 80/115 (69%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 260 QYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
+ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEIS 122
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 130 bits (313), Expect = 1e-31
Identities = 61/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-TT 259
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP T
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 260 QYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
+ + + F++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S
Sbjct: 98 IFDIKRLIGR-KFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEIS 151
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 83.8 bits (198), Expect = 1e-17
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVV 349
NP + F++ VQ D+K P+++V
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 7e-08
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 6e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.7 bits (66), Expect = 0.11
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 260 QYSMPNVS---SDVSFEDATVQADMKHWP 337
+S+ NV E VQ +P
Sbjct: 84 -HSIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.45
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 200 DTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSFEDATVQADMKHWP 337
+ + L+G A KN+ + + Y+ P +S V F D K +P
Sbjct: 387 EEQPLVGSAIKNEGSEKASLAYTYPCPTSHVEFVQLLKGLDYKDYP 432
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 1.8
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 3.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 25.4 bits (53), Expect = 4.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSD--VSFEDATVQADMKHWPF 340
P +A T ER++ AAK A+N T Y++ ++ D + + V+A + +PF
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIECNVRAS-RSFPF 1306
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 25.0 bits (52), Expect = 5.6
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 390 PXYATLILGLPPS--LTTSKGQCFMSACTVASSKLTSDETFGIEY 262
P Y TL+ LPPS LT S G ++ ++ S ++ G Y
Sbjct: 285 PSYTTLVSQLPPSPCLTVSSGPLSTASSIPSNCSCPSVKSSGPSY 329
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.0 bits (52), Expect = 5.6
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Frame = -1
Query: 342 SKGQCFMSACTVASSKLTSDETFGIEYCVVGFIATWFLAASPMRRSVSVNAT*DGV---- 175
+K + + +CT+ T +E G+E + +W L A R ++ DG+
Sbjct: 360 TKNRWTIVSCTMLKRAATDEERLGVEEQIRAAGRSWILEA---LRPGAITIPDDGLNELN 416
Query: 174 --VLLPWSLAMISTFPCWKTPTQEYVVPR 94
V+ A +S P KT T +VP+
Sbjct: 417 NNVVEKAEPAPVSEIPLSKTLTSHKIVPK 445
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 5.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPARE 138
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 361 ASITDNLERPVLHVGLHSS 305
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 86 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 172
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 191 AFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDV 292
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 9.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 105 RTLALVSSSTGR-WRSSPTTRATGPLRLMLRSQTPSVSSEMP 227
++L VSS++ + RSSP +L R TP+V + P
Sbjct: 351 QSLTTVSSNSSQNGRSSPKKSFLSKFKLTSRPSTPNVGNTAP 392
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 24.2 bits (50), Expect = 9.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 96 WVPRTLALVSSSTGRWRSSPTTRATGP-LRLMLRSQTPSVSS 218
W R + SSS R RSS ++R + P LRS S+SS
Sbjct: 90 WANRHSNVSSSSGSRGRSSVSSRDSSPSYSGALRSAERSISS 131
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 24.2 bits (50), Expect = 9.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 197 TDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSFEDATVQAD 322
T E L ++ N + MPN +DVS E A + D
Sbjct: 494 TMAEILSSKGLESPQLTNSVSVSKMPNTDADVSLEHAKISFD 535
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 24.2 bits (50), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 224 AAKNQVAMNPTTQYSMPNVSSD 289
A K Q+ +NP + +PNV D
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLED 344
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 218 GDAAKNQVAMNPTTQYSMPNVSSDVSFEDATVQAD 322
G + + +A+NPT+ S + SS S +T+ D
Sbjct: 340 GLESTSSIALNPTSSISSTSSSSSTSSAISTISQD 374
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 260 QYSMPNVSSDVSFEDATVQADMK 328
Q SMPN+S+ VS V+ MK
Sbjct: 591 QVSMPNISNIVSTNHLDVETQMK 613
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,007,044
Number of Sequences: 5004
Number of extensions: 42648
Number of successful extensions: 159
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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