Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0647.Seq
(459 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 1e-47
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 182 1e-46
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 180 4e-46
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 132 2e-31
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 68 3e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 3e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.46
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.4
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 2.4
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 4.3
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 28 4.3
SB_30323| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_41668| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 27 7.5
SB_49479| Best HMM Match : R3H (HMM E-Value=0.0079) 27 7.5
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 27 7.5
SB_55108| Best HMM Match : Oxidored_q1_N (HMM E-Value=5.5) 27 9.9
SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25) 27 9.9
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043) 27 9.9
SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25) 27 9.9
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 185 bits (451), Expect = 1e-47
Identities = 87/119 (73%), Positives = 95/119 (79%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEV 421
MNPT F+D V+ DMKHW FEVV++ G+PK+KV Y GE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEV 119
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 182 bits (443), Expect = 1e-46
Identities = 85/120 (70%), Positives = 94/120 (78%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
MNP F+D V DM HWPF V+ +G +PKI+V + GE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 180 bits (439), Expect = 4e-46
Identities = 84/120 (70%), Positives = 96/120 (80%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
+NP ++DATVQ+DMK WPF+++SD KPKI+V Y GE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 132 bits (318), Expect = 2e-31
Identities = 66/115 (57%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTT 259
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 260 QYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
S++D +VQ D+K +PF+VV KP ++V E KTF EE+S
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEIS 818
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 68.1 bits (159), Expect = 3e-12
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP-TTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSD-GGKPKIKVAYXGEDKTFFPEE 418
+NP T Y + ++ K + F V +D G V G PEE
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIG-KLYQFRVTTDKRGNAGFLVGKKGNFTVITPEE 148
Query: 419 VSXH 430
+ +
Sbjct: 149 IGGY 152
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 296 FEDATVQADMKHWPFEVVS-DGGKPKIKVAYXGEDKTFFPEEV 421
F D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 134 FSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQV 176
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.46
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 229 QEPGGDEPHNTIFDA 273
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 227 AKNQVAMNPTTQYSMPNVSSDVSFEDATVQAD 322
AKNQ+ NPT + FED+ ++ D
Sbjct: 429 AKNQIGQNPTNHAKNQRYLKSIVFEDSLIRND 460
>SB_30323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +3
Query: 126 SSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNIRCQTSHRT*VSKM 305
+S W+ +P RA ++ P+ +W+ TP H H VSK+
Sbjct: 571 TSMDNWQYTPLHRAAENGHESTLKLLLGAGCKIDPKDKWQFTPLHRAAAYGGHADTVSKL 630
Query: 306 L 308
L
Sbjct: 631 L 631
>SB_41668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 588
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 205 RASHRRCRQEPGGDEPHNTIFDAKRLIGRKFRRCYCASRH------EALAFRGCQ*WRQT 366
R+++ CR + GGD+ + +F LI + +R Y RH +A+ F C W
Sbjct: 5 RSTYWACRPDDGGDDVRSHVFP---LIRVQQQRHYLRGRHLVTYQTQAMVFTLCILWPGL 61
Query: 367 *DQGSIXG 390
+ G++ G
Sbjct: 62 SEVGALSG 69
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +2
Query: 77 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 256
P G+DL G+FQ GK+++ + + +++A + +GDAAK ++ +
Sbjct: 547 PTGGLDLS------GMFQ-GKIQVASTAESEAGRKAFLAECERNPNLGDAAKMKLESCLS 599
Query: 257 TQYSMPNVSSDVSFED 304
S N+ D+ E+
Sbjct: 600 DLVSTANIFKDLLQEE 615
>SB_49479| Best HMM Match : R3H (HMM E-Value=0.0079)
Length = 605
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 197 TDTERLIGDAAKNQVAMNPT 256
TD ERL GD K+ V +NPT
Sbjct: 386 TDEERLSGDKDKDVVQVNPT 405
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ R GY L R C R + +R + H++L R +RC
Sbjct: 661 LRLVNTRDDKTHGKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTDTETRFCEKRCA 718
Query: 229 QEPGGDEPHNTIFDA 273
G +P N F+A
Sbjct: 719 GTASGMDPKNIPFNA 733
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 456 SFLHXRKAPXKLTSSGKKVLSSPXYATLILGLPPSLTTSK 337
+FL + P S+ + LSSP Y T +PP + +K
Sbjct: 222 NFLQAVRIPLVDASATSEELSSPLYKTFFRTIPPDVNQAK 261
>SB_55108| Best HMM Match : Oxidored_q1_N (HMM E-Value=5.5)
Length = 377
Score = 26.6 bits (56), Expect = 9.9
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = -1
Query: 342 SKGQCFMSACTVASSKLTS----DETFGIEYCVVGFIATWFLAASPM-RRSVSVNAT*DG 178
SK F S ++ KLT + F EY +G +A S + RR++S ++T DG
Sbjct: 259 SKQLAFKSLASMKGPKLTQPMEKERPFKPEY-TMGLLAVLARVVSCVNRRTLSNSSTIDG 317
Query: 177 VVLLPWSLAMISTFPCWKT 121
LLP A + FP + T
Sbjct: 318 TRLLPLKTATLG-FPEFDT 335
>SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 397 VFTLICYLDLRFASITDNLERPVLH-VGLHSSIFETYVR*DVWHRILC-CGVHRHLVLGG 224
+FT IC L AS+T+ ++PV + S+ + V+ +I C CG RHL+
Sbjct: 131 LFTSICKLHQEQASLTNYFKKPVTKPIQADGSLCHLEMDLIVFRKIPCNCG-RRHLLALH 189
Query: 223 ISD 215
+ D
Sbjct: 190 VED 192
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 167 CPGRWR*SPPSRAGRHQRKSTWY 99
C GRW S AG ++KS WY
Sbjct: 3726 CVGRWWKEIKSLAGVSEKKSRWY 3748
>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
Length = 801
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 142 HLPVLEDTNARVRGTQIDSYCGCFCHFVF 56
+LP +E +NAR G ++ +Y + FVF
Sbjct: 293 NLPGIEKSNARTMGNRLQAYQSSYQVFVF 321
>SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 397 VFTLICYLDLRFASITDNLERPVLH-VGLHSSIFETYVR*DVWHRILC-CGVHRHLVLGG 224
+FT IC L AS+T+ ++PV + S+ + V+ +I C CG RHL+
Sbjct: 131 LFTSICKLHQEQASLTNYFKKPVTKPIQADGSLCHLEMDLIVFRKIPCNCG-RRHLLALH 189
Query: 223 ISD 215
+ D
Sbjct: 190 VED 192
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,996,938
Number of Sequences: 59808
Number of extensions: 373562
Number of successful extensions: 1291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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