Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0647.Seq
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 179 8e-46
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 179 8e-46
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 152 1e-37
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 152 1e-37
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 148 2e-36
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 140 4e-34
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 140 4e-34
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 138 1e-33
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 77 5e-15
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 77 5e-15
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 73 8e-14
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 73 8e-14
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 60 8e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 56 9e-09
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z47074-1|CAA87375.2| 851|Caenorhabditis elegans Hypothetical pr... 29 1.2
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 29 1.2
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 2.8
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 2.8
AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical ... 28 3.8
AC024794-6|AAK68493.2| 425|Caenorhabditis elegans Hypothetical ... 28 3.8
AL032652-1|CAA21709.1| 317|Caenorhabditis elegans Hypothetical ... 27 5.0
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 5.0
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.7
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024793-4|AAF60694.2| 318|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 179 bits (436), Expect = 8e-46
Identities = 86/121 (71%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVS-DGGKPKIKVAYXGEDKTFFPEEV 421
MNP F+D VQ+DMKHWPF+V+S +G KPK++V Y GE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 422 S 424
S
Sbjct: 121 S 121
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 179 bits (436), Expect = 8e-46
Identities = 86/121 (71%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVS-DGGKPKIKVAYXGEDKTFFPEEV 421
MNP F+D VQ+DMKHWPF+V+S +G KPK++V Y GE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 422 S 424
S
Sbjct: 121 S 121
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 152 bits (368), Expect = 1e-37
Identities = 70/120 (58%), Positives = 87/120 (72%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
NP F+++TVQ+D KHWPF V GKP I+V GE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 152 bits (368), Expect = 1e-37
Identities = 70/120 (58%), Positives = 87/120 (72%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
NP F+++TVQ+D KHWPF V GKP I+V GE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 148 bits (359), Expect = 2e-36
Identities = 68/120 (56%), Positives = 86/120 (71%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
NP F++ TVQ+D+KHWPF V GKP ++V GE + F EE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 140 bits (339), Expect = 4e-34
Identities = 66/116 (56%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPT 256
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 257 TQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
+ D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 140 bits (339), Expect = 4e-34
Identities = 66/116 (56%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPT 256
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 257 TQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
+ D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 138 bits (335), Expect = 1e-33
Identities = 67/116 (57%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPT 256
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 257 TQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTFFPEEVS 424
+ + TVQ D+KHWPF++V KP ++V E K F PEEVS
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVS 148
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 77.4 bits (182), Expect = 5e-15
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 256
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 257 TQYSMPNVSSDVSFEDATVQADMKHWPFEV-VSDGGKPKIKV 379
+ + + + ++D +Q DM WPF+V D G P +++
Sbjct: 62 SLFDVKRIIGR-RYDDVLLQRDMPLWPFKVEKDDNGIPYLEI 102
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 77.4 bits (182), Expect = 5e-15
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 256
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 257 TQYSMPNVSSDVSFEDATVQADMKHWPFEV-VSDGGKPKIKV 379
+ + + + ++D +Q DM WPF+V D G P +++
Sbjct: 62 SLFDVKRIIGR-RYDDVLLQRDMPLWPFKVEKDDNGIPYLEI 102
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 73.3 bits (172), Expect = 8e-14
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 248 NPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVV 349
N +ED VQ D+K P+++V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 73.3 bits (172), Expect = 8e-14
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 248 NPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVV 349
N +ED VQ D+K P+++V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 60.1 bits (139), Expect = 8e-10
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Frame = +2
Query: 56 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 220
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 221 DAAKNQVAMNP-TTQYSMPN-VSSDVSFEDATVQADMKHWPFEVVSDG-GKPKIKVAYXG 391
A Q NP T Y + + + +D K +PF++ D GK ++
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144
Query: 392 EDKTFFPEEV 421
K +PEE+
Sbjct: 145 GTKNVYPEEI 154
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 56.4 bits (130), Expect = 9e-09
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN-PTT 259
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N T
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 260 QYSMPNVSSDVSFEDATVQADMKHWPFEVVS-DGGKPKIKVAYXGEDKTFFPEEV 421
+ ++ F D Q + P +VV ++V+Y GE TF PE+V
Sbjct: 64 VINFKHLIGR-KFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQV 117
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.7 bits (81), Expect = 0.008
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 229
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>Z47074-1|CAA87375.2| 851|Caenorhabditis elegans Hypothetical
protein K07C10.1 protein.
Length = 851
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 375 LILGLPPSLTTSKGQCFMSACTVASSKLTSDETFGIEYCVVGFIATW 235
L+ L + T CF+ + + + S T I +C++GF++ W
Sbjct: 671 LVKSLAITFTCMTIACFVIMPSFVAPTIASVATVSISFCLIGFLSIW 717
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 196 HRHRASHRR--CRQEPGGDEPHNTIFDAKRLI 285
H+HR SHR Q+ GDE +N + DA R +
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSV 378
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFRRCYCASRHEALAFRGC 348
PH+T+ A ++ R+ R CA +E L GC
Sbjct: 10 PHSTVHSA--VLSRRHRSVICAGPYEVLPLEGC 40
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 420 TSSGKKVLSSPXYATLILGLPPSLTTSKGQCFMSACTVASSKLTS 286
+SS +SSP Y T + LPPS + S + T S LTS
Sbjct: 1105 SSSSHSQVSSPTYKTPQIQLPPSSSASSSSSSQNNTTDWSPMLTS 1149
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 135 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 236
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical
protein B0273.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 244 DEPHNTIFDAKRLIGRKFRRCYCASRHEALA 336
DE H + +RL+ R FRR C + EA A
Sbjct: 334 DESHTNVEFPRRLVERNFRRIACDTCKEASA 364
>AC024794-6|AAK68493.2| 425|Caenorhabditis elegans Hypothetical
protein Y48G1BM.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 244 DEPHNTIFDAKRLIGRKFRRCYCASRHEALA 336
DE H + +RL+ R FRR C + EA A
Sbjct: 334 DESHTNVEFPRRLVERNFRRIACDTCKEASA 364
>AL032652-1|CAA21709.1| 317|Caenorhabditis elegans Hypothetical
protein Y63D3A.2 protein.
Length = 317
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 248 NPTTQYSMPNVSSDVSFEDATVQADMKHWPFEVVSDGGKPKIKVAYXGEDKTF 406
NP +Y + + FE+ V +K P ++ G K++V + G KTF
Sbjct: 234 NPRMRYYRSPLQEPLQFEEQFVAQILKGIPHRAITPGELEKLRVQFRG--KTF 284
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 259 CCGVHRHLVLGGISDETLGVCERNIRRSGPVA 164
CC H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 171 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 67
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 145 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 231
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 145 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 231
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 96 WVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMP 227
WV L V+++ W++ PLRL L + +V + +P
Sbjct: 217 WVSNLLPCVTANITNWKTPTNDEMCPPLRLELNQKIFNVENYIP 260
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 125 RHQRKSTWYPDRFLLR 78
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
>AC024793-4|AAF60694.2| 318|Caenorhabditis elegans Hypothetical
protein Y48G1BL.1 protein.
Length = 318
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 244 DEPHNTIFDAKRLIGRKFRRCYCASRHEALA 336
DE H + +RL+ R FRR C + EA A
Sbjct: 227 DESHVNVEFPRRLVERNFRRIACDTCKEASA 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,455,013
Number of Sequences: 27780
Number of extensions: 257505
Number of successful extensions: 778
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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