BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0646.Seq (538 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 35 0.036 01_06_0392 + 28964006-28964204,28964496-28964977,28965075-28965176 31 0.58 01_06_1627 + 38742294-38742746,38742831-38743120,38743544-38744027 30 1.3 08_02_1160 - 24793708-24794796,24794888-24794951,24795028-247951... 29 1.8 05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 29 2.3 05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 29 2.3 02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 3.1 03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007 28 4.1 06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 27 7.2 06_01_0630 - 4598804-4599295,4599627-4599965,4600002-4600039,460... 27 7.2 05_03_0060 - 7905455-7906216,7906723-7906887 27 7.2 12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 27 9.5 12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 27 9.5 12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 27 9.5 10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 27 9.5 06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561... 27 9.5 05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 27 9.5 05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 27 9.5 02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 27 9.5 02_05_1167 - 34638709-34639104,34640653-34642158 27 9.5 01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 27 9.5 01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019,350... 27 9.5 >12_02_1007 - 25248653-25249078,25249956-25250021,25250108-25250260, 25250961-25251336,25252001-25252143 Length = 387 Score = 35.1 bits (77), Expect = 0.036 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +3 Query: 126 KYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLR 281 K AA+S ++ +NKD S +G + K + KSK S P CR+++ R Sbjct: 160 KMPAAASPTTTMNKDETSDDSGERKKKKASSAAGKSKQAS-PRGCRSSQPYR 210 >01_06_0392 + 28964006-28964204,28964496-28964977,28965075-28965176 Length = 260 Score = 31.1 bits (67), Expect = 0.58 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 13/134 (9%) Frame = +3 Query: 57 AALSVKAFGHHP-GNRDTVEVKNRKYNAASSESSYLNKDNDSISAGAHRAKS-------- 209 A L K G HP G+ D N K NAA + S+ ++ D+ S G H S Sbjct: 9 AKLKKKQQGDHPAGSDDGGNNNNNKNNAAENGSNDSSRRRDAASDGNHHLPSRPNVPHVD 68 Query: 210 -VEQSQDKSKYTSGPEACRTAEGLRTIKIPSKLMPIITAIRTADLL---LPDNLATAA*E 377 E S + S+ P A + K + +P+ +++ LP A A E Sbjct: 69 VSEDSMESSEEMVTPRAAASEADEEERKAATSEVPVEVVEAGEEVMVDALPPEAAAGAQE 128 Query: 378 RETYITSLTVKQWP 419 ++ +L V Q P Sbjct: 129 QQGKAEALVVVQEP 142 >01_06_1627 + 38742294-38742746,38742831-38743120,38743544-38744027 Length = 408 Score = 29.9 bits (64), Expect = 1.3 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 10/91 (10%) Frame = +2 Query: 233 QIYIWSRSVSYSGRSQNYKDSKQA------YADYHSDPNGGSASAGQSRDSSLRERNVHY 394 +I W S R + DS A D H P+GG A + S ++ V Y Sbjct: 281 RIKTWGNSKRGFVRGVTFSDSTMAGVGNPIIIDQHYCPDGGCGGAARGSSSGIKISEVEY 340 Query: 395 V----SDGEAVAASSDARDENRSANIMLRPI 475 S VA S D N + I LR + Sbjct: 341 ADVRGSSATPVAVSFDCSRSNPCSGIRLRDV 371 >08_02_1160 - 24793708-24794796,24794888-24794951,24795028-24795146, 24795496-24795612,24796365-24796406,24797342-24797506, 24797806-24797898,24798190-24798291,24798360-24798501, 24799301-24799651,24799741-24799839,24800019-24800230, 24800394-24800429 Length = 876 Score = 29.5 bits (63), Expect = 1.8 Identities = 19/72 (26%), Positives = 31/72 (43%) Frame = +2 Query: 245 WSRSVSYSGRSQNYKDSKQAYADYHSDPNGGSASAGQSRDSSLRERNVHYVSDGEAVAAS 424 W+ + S + NY+ +YH+ GS + S D S E+ +S+ E Sbjct: 626 WTDTNGRSRQPCNYEGRNDPTHEYHAGMGCGSDMSISSSDKSDCEKQTETMSNSEHGHTG 685 Query: 425 SDARDENRSANI 460 S+A D SA + Sbjct: 686 SEAHDHVGSAPV 697 >05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629, 18238033-18238041,18238096-18238248 Length = 1465 Score = 29.1 bits (62), Expect = 2.3 Identities = 18/49 (36%), Positives = 30/49 (61%) Frame = +2 Query: 350 GQSRDSSLRERNVHYVSDGEAVAASSDARDENRSANIMLRPIGTLTXLY 496 G S+ SS R R ++Y+ +GE S+D +DE+ + +L G+LT L+ Sbjct: 918 GASQGSSRRVRTLYYIYNGER-EGSTDTKDEHILPDHLL-SWGSLTKLH 964 >05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281, 18203336-18203551,18204257-18204361,18204761-18204919 Length = 1401 Score = 29.1 bits (62), Expect = 2.3 Identities = 18/49 (36%), Positives = 30/49 (61%) Frame = +2 Query: 350 GQSRDSSLRERNVHYVSDGEAVAASSDARDENRSANIMLRPIGTLTXLY 496 G S+ SS R R ++Y+ +GE S+D +DE+ + +L G+LT L+ Sbjct: 918 GASQGSSRRVRTLYYIYNGER-EGSTDTKDEHILPDHLL-SWGSLTKLH 964 >02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498, 1625603-1625887,1626016-1626030,1626339-1626419, 1626909-1627322,1627423-1627719,1627801-1629864 Length = 3057 Score = 28.7 bits (61), Expect = 3.1 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 108 VEVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQ-SQDKSKYTSGPE 254 VEV++ SE N+++ +AG H + +E DKSK T E Sbjct: 2737 VEVRSTTEGQVESEVIETNEEDQHTTAGGHTEEQIENLHDDKSKETCSEE 2786 >03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007 Length = 261 Score = 28.3 bits (60), Expect = 4.1 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +2 Query: 326 PNGGSASAGQSRDSSLRERNVHYVSDGEAVAA 421 P G S+S+ SRD E NV GEA A Sbjct: 107 PKGSSSSSSSSRDKKEDEHNVSSQPQGEAAMA 138 >06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104, 25541673-25541751,25542151-25542238,25542330-25542600, 25542676-25542718,25542801-25542904,25543374-25543790 Length = 2068 Score = 27.5 bits (58), Expect = 7.2 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 296 KQAYADYHSDPNGGSASAGQSRDSSLRER 382 ++ Y+D+H P GGS +G + ++ R R Sbjct: 13 RRHYSDHHHFPPGGSGGSGGAASAAARSR 41 >06_01_0630 - 4598804-4599295,4599627-4599965,4600002-4600039, 4600145-4600460,4600541-4600794,4601586-4601651, 4603422-4603617 Length = 566 Score = 27.5 bits (58), Expect = 7.2 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 5/101 (4%) Frame = +2 Query: 236 IYIWSRSVSYSGRSQNYKDSKQAYADYHSDPNGGSASAG----QSRDSSLRERNVHYVSD 403 + +WS +V+ + + D A Y DPNG + G D LR Sbjct: 19 LVVWSSAVAAAAAATTGGDVSVALEAYRLDPNGSGSRTGAITAAHGDGRLRRTKPR---S 75 Query: 404 GEAVAASSDARDENRSANI-MLRPIGTLTXLYGVSAIEVVP 523 A+A S E + N + R +G L YG VP Sbjct: 76 RRAMAPSVQLGGETKRTNAGVRRDLGALPRGYGKELKIAVP 116 >05_03_0060 - 7905455-7906216,7906723-7906887 Length = 308 Score = 27.5 bits (58), Expect = 7.2 Identities = 23/67 (34%), Positives = 30/67 (44%) Frame = -1 Query: 439 IASVTGSGHCFTVRDVMYVSLSQAAVARLSGRSRSAVRIAVIIGISLLGIFIVLRPSAVR 260 I S GS F +RDV + L +AAV R A +S I ++ SAV Sbjct: 71 ITSELGSDKNFGIRDVSTIGLVKAAVER-----------ACPGQVSCADIVVLAARSAVA 119 Query: 259 HASGPDV 239 HA GP + Sbjct: 120 HAGGPRI 126 >12_02_0642 + 21454142-21454251,21454683-21454872,21454988-21455069, 21455224-21455802,21455854-21456909,21457133-21457251, 21457369-21457812 Length = 859 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 222 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 278 >12_02_0639 + 21443480-21443589,21444022-21444211,21444327-21444408, 21444563-21445054,21445221-21446246,21446470-21446588, 21446706-21447149 Length = 820 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 222 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 278 >12_02_0633 + 21402847-21402862,21403143-21404975,21405052-21405170, 21405288-21405722 Length = 800 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 100 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 156 >10_08_0848 + 21035446-21035461,21035742-21036233,21036400-21036956, 21037084-21037539,21037886-21038302 Length = 645 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 100 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 156 >06_03_1494 + 30554997-30555608,30555707-30555915,30556006-30556155, 30556254-30556312,30556852-30556961,30557216-30557322, 30557443-30557581,30557705-30557821,30557918-30558025, 30558221-30558292,30558783-30558948,30559044-30559165, 30559245-30559382,30559462-30559604,30559699-30559761, 30560107-30560170,30560238-30560373,30560478-30560551, 30560640-30560734,30560829-30560860,30560973-30561175 Length = 972 Score = 27.1 bits (57), Expect = 9.5 Identities = 21/81 (25%), Positives = 32/81 (39%) Frame = +2 Query: 269 GRSQNYKDSKQAYADYHSDPNGGSASAGQSRDSSLRERNVHYVSDGEAVAASSDARDENR 448 GR Y ++Q YH +GG AG ++ + R V A+++ + Sbjct: 28 GRGSYYPQAQQ----YHPQGHGGRGGAGYYHGAAPQPRGAMVVQQWRPATAAAEHLGHQQ 83 Query: 449 SANIMLRPIGTLTXLYGVSAI 511 N +RP YG SAI Sbjct: 84 PYNSSVRP----QHYYGPSAI 100 >05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631, 9415749-9416192 Length = 719 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 104 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 160 >05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990, 7957103-7957559 Length = 946 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 247 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 303 >02_05_1241 - 35189111-35189389,35189604-35189711,35189982-35190713, 35190811-35191230,35191484-35191565,35191719-35192002, 35193104-35193256 Length = 685 Score = 27.1 bits (57), Expect = 9.5 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = +2 Query: 344 SAGQSRDSSLRERNVHYVSDGEAVAASSDARD 439 +A +++SS +E+N+H +DG+ V D Sbjct: 630 AASSTKNSSNQEKNIHGAADGDVVDDEGSGND 661 >02_05_1167 - 34638709-34639104,34640653-34642158 Length = 633 Score = 27.1 bits (57), Expect = 9.5 Identities = 20/89 (22%), Positives = 38/89 (42%) Frame = +2 Query: 263 YSGRSQNYKDSKQAYADYHSDPNGGSASAGQSRDSSLRERNVHYVSDGEAVAASSDARDE 442 + G+ D K + A+ S G G+ ++SS +++ A+S D+ Sbjct: 395 WGGKKGTKNDEKPSKANQGSKDESGDLGKGKEKNSSKKKKG----------ASSGDSTKH 444 Query: 443 NRSANIMLRPIGTLTXLYGVSAIEVVPLV 529 LRP+ LT + + E++PL+ Sbjct: 445 ESEYKKGLRPVLWLTPDFPLKTDELIPLL 473 >01_04_0076 + 15780981-15780996,15781277-15783109,15783186-15783304, 15783422-15783724 Length = 756 Score = 27.1 bits (57), Expect = 9.5 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 111 EVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACRTAEGLRTI 287 E KN++ A +E N D +S S G+ +V K K T+G + R+ G TI Sbjct: 100 EQKNKEKEVARAEVDIENSDCESGSEGSDHGNNV--LVVKPKETTGSSSSRSVAGGHTI 156 >01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019, 3502385-3502473,3502601-3502765,3502841-3502918, 3503087-3503190,3503317-3503422 Length = 427 Score = 27.1 bits (57), Expect = 9.5 Identities = 13/41 (31%), Positives = 19/41 (46%) Frame = +2 Query: 320 SDPNGGSASAGQSRDSSLRERNVHYVSDGEAVAASSDARDE 442 +DP GG G E ++ V GEA A+S+ +E Sbjct: 55 ADPGGGPHQVGGGGGGGGGEVSIRIVGSGEAAGAASERGEE 95 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,893,573 Number of Sequences: 37544 Number of extensions: 269838 Number of successful extensions: 1018 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 999 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1017 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1186491600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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