Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0646.Seq
(538 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U38254-1|AAC50283.1| 638|Homo sapiens amiloride sensitive sodiu... 35 0.21
DQ898176-1|ABI64069.1| 704|Homo sapiens sodium channel nonvolta... 35 0.21
DQ898175-1|ABI64068.1| 638|Homo sapiens sodium channel nonvolta... 35 0.21
BC125075-1|AAI25076.1| 378|Homo sapiens SCNN1D protein protein. 35 0.21
BC125074-1|AAI25075.1| 638|Homo sapiens sodium channel, nonvolt... 35 0.21
BC036752-1|AAH36752.1| 560|Homo sapiens Similar to sodium chann... 35 0.21
AL162741-20|CAI23262.1| 638|Homo sapiens sodium channel, nonvol... 35 0.21
AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel, nonvol... 35 0.21
AK131558-1|BAD18692.1| 669|Homo sapiens protein ( Homo sapiens ... 35 0.21
AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens ... 35 0.21
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l... 30 4.5
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p... 30 4.5
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p... 30 4.5
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 30 4.5
AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein. 30 4.5
BC117416-1|AAI17417.1| 818|Homo sapiens Rho-type GTPase-activat... 29 7.9
BC117412-1|AAI17413.1| 818|Homo sapiens Rho-type GTPase-activat... 29 7.9
BC035246-1|AAH35246.2| 817|Homo sapiens KIAA1666 protein protein. 29 7.9
AB051453-1|BAB33336.1| 1003|Homo sapiens KIAA1666 protein protein. 29 7.9
AB014572-1|BAA31647.2| 824|Homo sapiens KIAA0672 protein protein. 29 7.9
>U38254-1|AAC50283.1| 638|Homo sapiens amiloride sensitive sodium
channel delta subunit protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 98 ALCWQLGLLFERHWHRPVL 116
>DQ898176-1|ABI64069.1| 704|Homo sapiens sodium channel
nonvoltage-gated 1 delta protein.
Length = 704
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 164 ALCWQLGLLFERHWHRPVL 182
>DQ898175-1|ABI64068.1| 638|Homo sapiens sodium channel
nonvoltage-gated 1 delta protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 98 ALCWQLGLLFERHWHRPVL 116
>BC125075-1|AAI25076.1| 378|Homo sapiens SCNN1D protein protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 98 ALCWQLGLLFERHWHRPVL 116
>BC125074-1|AAI25075.1| 638|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 98 ALCWQLGLLFERHWHRPVL 116
>BC036752-1|AAH36752.1| 560|Homo sapiens Similar to sodium channel,
nonvoltage-gated 1, delta protein.
Length = 560
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 98 ALCWQLGLLFERHWHRPVL 116
>AL162741-20|CAI23262.1| 638|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 98 ALCWQLGLLFERHWHRPVL 116
>AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 704
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 164 ALCWQLGLLFERHWHRPVL 182
>AK131558-1|BAD18692.1| 669|Homo sapiens protein ( Homo sapiens
cDNA FLJ16802 fis, clone TESTI4005158, highly similar
to Amiloride-sensitive sodium channel delta-subunit. ).
Length = 669
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 129 ALCWQLGLLFERHWHRPVL 147
>AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ35920 fis, clone TESTI2010591, highly similar to
AMILORIDE-SENSITIVE SODIUM CHANNEL DELTA-SUBUNIT. ).
Length = 704
Score = 34.7 bits (76), Expect = 0.21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 464 ALCWRIGFHRERHWKRPLL 408
ALCW++G ERHW RP+L
Sbjct: 164 ALCWQLGLLFERHWHRPVL 182
>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like
5 (cholinesterase-related cell division controller)
protein.
Length = 1512
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 123 RKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACR 263
RK +A+S SS KD DS AHR+++ + S Y P+A R
Sbjct: 258 RKSASATSSSSSSRKDRDS---KAHRSRTKSSKEPPSAYKEPPKAYR 301
>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1452
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 123 RKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACR 263
RK +A+S SS KD DS AHR+++ + S Y P+A R
Sbjct: 258 RKSASATSSSSSSRKDRDS---KAHRSRTKSSKEPPSAYKEPPKAYR 301
>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1512
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 123 RKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACR 263
RK +A+S SS KD DS AHR+++ + S Y P+A R
Sbjct: 258 RKSASATSSSSSSRKDRDS---KAHRSRTKSSKEPPSAYKEPPKAYR 301
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 30.3 bits (65), Expect = 4.5
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 248 SRSVSYSGRSQNYKDS-KQAYADYHSDPNGGSASAGQSRDSSLRERNVHYVSDGEAVAAS 424
S + S S S + DS + + SD + GS S +R S + SD + S
Sbjct: 358 SSNSSDSSNSSDSSDSCNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDS 417
Query: 425 SDARDENRSAN 457
SD+ D N S+N
Sbjct: 418 SDSSDSNESSN 428
>AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 123 RKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEACR 263
RK +A+S SS KD DS AHR+++ + S Y P+A R
Sbjct: 258 RKSASATSSSSSSRKDRDS---KAHRSRTKSSKEPPSAYKEPPKAYR 301
>BC117416-1|AAI17417.1| 818|Homo sapiens Rho-type GTPase-activating
protein RICH2 protein.
Length = 818
Score = 29.5 bits (63), Expect = 7.9
Identities = 23/88 (26%), Positives = 33/88 (37%)
Frame = +3
Query: 51 ALAALSVKAFGHHPGNRDTVEVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDK 230
A ALS G PG T K+++ + S++ + AG
Sbjct: 569 AAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGA 628
Query: 231 SKYTSGPEACRTAEGLRTIKIPSKLMPI 314
S S P A ++ LR K+ KL PI
Sbjct: 629 SPSPSQPPADQSPHTLR--KVSKKLAPI 654
>BC117412-1|AAI17413.1| 818|Homo sapiens Rho-type GTPase-activating
protein RICH2 protein.
Length = 818
Score = 29.5 bits (63), Expect = 7.9
Identities = 23/88 (26%), Positives = 33/88 (37%)
Frame = +3
Query: 51 ALAALSVKAFGHHPGNRDTVEVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDK 230
A ALS G PG T K+++ + S++ + AG
Sbjct: 569 AAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGA 628
Query: 231 SKYTSGPEACRTAEGLRTIKIPSKLMPI 314
S S P A ++ LR K+ KL PI
Sbjct: 629 SPSPSQPPADQSPHTLR--KVSKKLAPI 654
>BC035246-1|AAH35246.2| 817|Homo sapiens KIAA1666 protein protein.
Length = 817
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 3 DPKTANMRFVLCCTLIALAALSVKAFGHHPGN 98
DP T + F +C ++LA S KA H+PG+
Sbjct: 381 DPSTYRVTFPVCPQKLSLAPPSAKASPHNPGS 412
>AB051453-1|BAB33336.1| 1003|Homo sapiens KIAA1666 protein protein.
Length = 1003
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 3 DPKTANMRFVLCCTLIALAALSVKAFGHHPGN 98
DP T + F +C ++LA S KA H+PG+
Sbjct: 567 DPSTYRVTFPVCPQKLSLAPPSAKASPHNPGS 598
>AB014572-1|BAA31647.2| 824|Homo sapiens KIAA0672 protein protein.
Length = 824
Score = 29.5 bits (63), Expect = 7.9
Identities = 23/88 (26%), Positives = 33/88 (37%)
Frame = +3
Query: 51 ALAALSVKAFGHHPGNRDTVEVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDK 230
A ALS G PG T K+++ + S++ + AG
Sbjct: 575 AAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGA 634
Query: 231 SKYTSGPEACRTAEGLRTIKIPSKLMPI 314
S S P A ++ LR K+ KL PI
Sbjct: 635 SPSPSQPPADQSPHTLR--KVSKKLAPI 660
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,201,935
Number of Sequences: 237096
Number of extensions: 1362251
Number of successful extensions: 4759
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4759
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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