Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0645.Seq
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 34 0.33
X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI repe... 32 1.3
AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critic... 32 1.8
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 31 2.3
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 31 2.3
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 31 2.3
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 31 2.3
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 31 2.3
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 31 2.3
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 31 2.3
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 31 2.3
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 31 2.3
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 31 2.3
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 31 2.3
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 31 2.3
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 31 2.3
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 31 2.3
AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein. 31 2.3
X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for L... 31 3.1
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 31 4.1
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 31 4.1
AK126793-1|BAC86696.1| 188|Homo sapiens protein ( Homo sapiens ... 29 9.5
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.33
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA +G+ + + G E
Sbjct: 243 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYGKPTANIILNGQKLE 298
>X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI
repetitive sequence (T-betaG41) 3kb downstream of
beta-globin gene. ).
Length = 140
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + +G E
Sbjct: 32 HMIISIDAEKAFDKIQQCFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILSGQKLE 87
>AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critical
region candidate gene number 6 protein.
Length = 578
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -3
Query: 275 RWRYQRVSVVVGLPQGSFLSPYLF-ILIMY---ALTTDIQEEAPWCMLFA 138
RW YQ +SVV+ L QG L YL + +Y + TD+ W + FA
Sbjct: 197 RWGYQALSVVLLLAQGGLLDLYLIAVTDLYWCSWIATDLVVVVGWAIFFA 246
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKIIRAIYDKPTANIILNGQKLE 649
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 511 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 566
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 166 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 221
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 649
>AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein.
Length = 573
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 108 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKIIRAIYDKPTANIILNGQKLE 163
>X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for
LINE-1 transposable element ORFI and II. ).
Length = 712
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 31 HMIVSIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLE 86
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = -1
Query: 418 MVFVDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNE 257
++ +D EKAFD + + + + G+ G Y ++IRA + + + + G E
Sbjct: 596 IISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLE 649
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYV 281
HM+ +D EKAFD + + + + G+ G Y ++IRA + + + +
Sbjct: 594 HMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANI 641
>AK126793-1|BAC86696.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ44843 fis, clone BRACE3050270. ).
Length = 188
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 421 HMVF-VDLEKAFDWVFRKVLW*NMKVRGVPGKYQRLIRATHGRTSTYVCSAGDTNEL 254
HM+ +D EKAFD + + + G+ G Y +++RA + + + + G E+
Sbjct: 5 HMIISIDAEKAFDEIQHHFMLKILDKLGIDGTYLKIVRAIYDKPTANIILNGHKLEV 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,664,976
Number of Sequences: 237096
Number of extensions: 1974400
Number of successful extensions: 3560
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3560
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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