Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0644.Seq
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 89 6e-17
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 82 7e-15
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 79 7e-14
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 1e-12
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 74 1e-12
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 72 8e-12
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 71 2e-11
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 69 7e-11
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 68 1e-10
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 68 1e-10
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 65 9e-10
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 65 9e-10
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 63 3e-09
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 61 1e-08
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 60 2e-08
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 46 3e-04
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.21
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 36 0.37
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 35 1.1
UniRef50_A7NYY2 Cluster: Chromosome chr6 scaffold_3, whole genom... 33 3.4
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 3.4
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_UPI0000519DC1 Cluster: PREDICTED: similar to CG40049-PB... 32 6.0
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 6.0
UniRef50_Q7KUP1 Cluster: CG5151-PB, isoform B; n=2; Drosophila m... 32 6.0
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 32 6.0
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 88.6 bits (210), Expect = 6e-17
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = +2
Query: 20 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 199
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 200 ISVSRLARHMKKPTRE 247
+S+SR+ R MK P RE
Sbjct: 61 LSLSRMIRKMKLPGRE 76
Score = 79.4 bits (187), Expect = 4e-14
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G T
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGT 136
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 81.8 bits (193), Expect = 7e-15
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +1
Query: 247 GFDAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
G AVVVG +T+DVR++K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL +P G T
Sbjct: 47 GKTAVVVGCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQNT 106
Score = 52.0 bits (119), Expect = 7e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +2
Query: 134 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREG 250
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREG 47
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 78.6 bits (185), Expect = 7e-14
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXK 423
AVVVGTVTND R+ +PK++V AL VTE AR RILA+GGE+LTFDQL +PTG +
Sbjct: 79 AVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSR 134
Score = 39.9 bits (89), Expect = 0.030
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +2
Query: 134 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK 235
T+ FN++VL+RL M R + P+S+S+L++HM+K
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK 73
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.5 bits (175), Expect = 1e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +2
Query: 20 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 199
+G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 200 ISVSRL 217
+++SR+
Sbjct: 170 LALSRM 175
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 74.1 bits (174), Expect = 1e-12
Identities = 37/56 (66%), Positives = 41/56 (73%)
Frame = +1
Query: 259 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
VVVGTVT+D RL +PK+ V AL TE AR RILAAGG+ LTFDQLA PTG T
Sbjct: 297 VVVGTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGT 352
Score = 35.9 bits (79), Expect = 0.48
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 8 LVVKMGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMS 181
L ++ G+D K R V R +V S ++ T+++FN VLRRL +
Sbjct: 212 LSIQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSQFNATVLRRLQST 270
Query: 182 RINRPPISVSRLARHM 229
R R PISVSRL + +
Sbjct: 271 RTARYPISVSRLVKQI 286
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 71.7 bits (168), Expect = 8e-12
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +1
Query: 259 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA+ AP G T
Sbjct: 82 VVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNT 137
Score = 61.7 bits (143), Expect = 9e-09
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 196
MGID K H R RT KS ++ T+A FN++VL+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 197 PISVSRLARHMKK 235
P+SVSR+AR +K+
Sbjct: 61 PVSVSRIARALKQ 73
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
AVVVG V +DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ APTG T
Sbjct: 87 AVVVGDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNT 143
Score = 39.1 bits (87), Expect = 0.052
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 134 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK 235
T++ FN++V +RL SR NR PIS+SR+A MK+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKR 73
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 68.5 bits (160), Expect = 7e-11
Identities = 30/54 (55%), Positives = 44/54 (81%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTG 417
A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G+IL+FDQLA+++P G
Sbjct: 68 AAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSPKG 121
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +1
Query: 259 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAP 411
VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLAL P
Sbjct: 77 VVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLP 127
Score = 58.4 bits (135), Expect = 8e-08
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 47 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 226
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 227 MK 232
M+
Sbjct: 68 MQ 69
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTG 417
AVVVG++T+D RL+ M V AL TE AR RI+ AGGE LTFDQLAL PTG
Sbjct: 135 AVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTG 188
Score = 41.9 bits (94), Expect = 0.007
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 8 LVVKMGIDI-NHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSR 184
+++ MGID+ N +K R + S++ T+ FN+I+ +RL M +
Sbjct: 53 ILINMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPK 112
Query: 185 INRPPISVSRLARHM 229
RPP+S+S+L +HM
Sbjct: 113 RFRPPLSLSKLQQHM 127
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 64.9 bits (151), Expect = 9e-10
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +1
Query: 259 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
VVVGTVT+DVRL +PK+ V TE AR RILAAGG+ LTFDQLA PTG T
Sbjct: 377 VVVGTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGT 428
Score = 34.7 bits (76), Expect = 1.1
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 134 TNAKFNQIVLRRLFMSRINRPPISVSRLARHM 229
T++ FN VLRRL +R R PISVSRL + +
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQI 366
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 64.9 bits (151), Expect = 9e-10
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAP 411
AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+ GG+ LTFDQLAL +P
Sbjct: 116 AVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSP 167
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXKT 426
AV V TVT D R Y +PKM V AL T+ A A I AGG+ L FD+LAL APTG KT
Sbjct: 78 AVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKT 133
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = +2
Query: 20 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 199
M ID++ H RK + + T +KF + +L RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 200 ISVSRLARHMKKPTRE 247
+S S+LA MKK E
Sbjct: 61 VSTSKLACLMKKHPEE 76
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +1
Query: 280 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTGXK 423
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL +P G K
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGK 172
Score = 38.3 bits (85), Expect = 0.091
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +2
Query: 134 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMK 232
T+ FN+IVL+RL M R + P+S+S+L++HM+
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME 72
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +1
Query: 256 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTG 417
AVV TVTND RL IP+MT+ AL + AR+RI AGG ++FD+L PTG
Sbjct: 79 AVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKPTG 132
Score = 42.7 bits (96), Expect = 0.004
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 196
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 197 PISVSRLARHMKK 235
+SVSRLA M K
Sbjct: 61 VLSVSRLAHLMHK 73
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 46.4 bits (105), Expect = 3e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +2
Query: 20 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 199
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 200 ISVSRLARHM 229
+ +SRL R M
Sbjct: 62 LLLSRLVRFM 71
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 46.4 bits (105), Expect = 3e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +2
Query: 20 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 199
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 200 ISVSRLARHM 229
+ +SRL R M
Sbjct: 62 LLLSRLVRFM 71
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 37.1 bits (82), Expect = 0.21
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +1
Query: 124 GQTYKCQIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDAVVVGTVTNDVRLYKI 303
G ++CQ++ R +P++ +T+ CVS + S G ++T + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 304 PKMTVAALHVTEKARARILA 363
++ VAA + E+ RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 36.3 bits (80), Expect = 0.37
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 253 DAVVV-GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALSAPTG 417
D VVV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L P G
Sbjct: 62 DVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRG 115
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 259 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQL 396
+ V + ND R+ K PK+ + AL+ + + +I+ GG+I +++
Sbjct: 104 LTVSKILNDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEI 149
>UniRef50_A7NYY2 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 638
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 181 PYQPATNLCVSFGAPHEEANS*GFDAVVVGTVTNDVRLYKIPKMTVAALHV 333
P P TNLC + H+ A S D + +VT+ L +P M++ AL V
Sbjct: 471 PDPPVTNLCDFVESDHDSAPSPDTDMSIDKSVTDSKALVSVPAMSMEALAV 521
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.1 bits (72), Expect = 3.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 307 KMTVAALHVTEKARARILAAGGEILTFDQLALSAPTG 417
K+ VAA ++KA+ +I +AGGE ++ D + S P G
Sbjct: 78 KVNVAAFKFSQKAQEKIESAGGECVSIDDIMESNPKG 114
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 32.7 bits (71), Expect = 4.5
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 374 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTT 258
SPP K+ + A +V +AA V FG + S VTVPTTT
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTT 41
>UniRef50_UPI0000519DC1 Cluster: PREDICTED: similar to CG40049-PB.3;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG40049-PB.3 - Apis mellifera
Length = 436
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 265 LPRHQTLTSWLLHVARQTRHRD 200
LP + L SWL+H+ +Q RHRD
Sbjct: 373 LPFYTKLPSWLIHLRKQERHRD 394
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -1
Query: 396 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 292
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_Q7KUP1 Cluster: CG5151-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG5151-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 695
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -1
Query: 372 SSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPHYHGIKPSRVG 235
+SS+ ++C+S + H+H +Y +Q CPH+ + S G
Sbjct: 371 NSSTGSSCSSLQSHSNDHHQHYQYQLQQQQTPRCPHHVPLPDSEYG 416
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = -3
Query: 244 TSWLLHVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 128
+++LL +R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 132 STFLLQGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 220 RQTRHRDWWPVDTAHKEP 167
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,019,044
Number of Sequences: 1657284
Number of extensions: 8980454
Number of successful extensions: 22736
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 22049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22720
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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