Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0644.Seq
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   1.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   9.8  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    22   9.8  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    22   9.8  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 246 SRVGFFMWRAKRDTEIGGRLIRLIKSRRRTI 154
           +RVG  +W +K   E   R +  IKS+RR +
Sbjct: 266 ARVGLELWGSKSIGECTQRQLDNIKSKRRVV 296


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 170  LFMSRINRPPISVSRLARHMKKPTRE--GLMPW*WGQSQMT*DCTRYR 307
            +F  ++NR  I+   L   MKKP R+   L P    + Q T + T +R
Sbjct: 1065 VFTDQVNRHTITRLLLNEAMKKPDRQFCFLTPQDMSEVQATAELTIHR 1112


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 229 HVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTSGQVSVKL 107
           ++ RQ    D W   T  K+P  +D     I TS   S++L
Sbjct: 580 YLVRQFDRADQWMEYTYTKDPLTDDYQLSAISTSNTASLQL 620


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 229 HVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTSGQVSVKL 107
           ++ RQ    D W   T  K+P  +D     I TS   S++L
Sbjct: 581 YLVRQFDRADQWMEYTYTKDPLTDDYQLSAISTSNTASLQL 621


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 276 DCPHYHGIKPSRV 238
           +C H+HG  PS V
Sbjct: 368 NCNHHHGFHPSTV 380


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 279 CDCPHYHGIKPSRV 238
           C  PHY  + P RV
Sbjct: 496 CSVPHYEPLDPERV 509


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,974
Number of Sequences: 2352
Number of extensions: 8751
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)