Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0642.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   3.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.1  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -3

Query: 497 CRNLMKXLTVGTGKSTXSQTQNPSSLEMQPLSTWYXXSLYV*SPSR 360
           C +L +    G GK         SSL++Q L+  +  + Y+  P R
Sbjct: 106 CLSLERPSGGGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPER 151


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 200 TIFHTTAILH 171
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 200 TIFHTTAILH 171
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 200 TIFHTTAILH 171
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 416 MQPLSTWYXXSLYV*SPSRNSHPSVV 339
           M  ++ W+    +   P+ NS+P++V
Sbjct: 65  MPGVTHWHSPRFHAYFPTANSYPAIV 90


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 152 KEKRATNSFLFYIFYKACNVTLFYNLYKVIHNISET 45
           KEK     ++ Y FYK  +     + +   HN++ T
Sbjct: 421 KEKADFQYYVSYDFYKMNHPVYHKDPHYGFHNVTNT 456


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 366 FQEFPPLGRFAVRDMR 319
           +  FPP  R  +RD R
Sbjct: 81  YPRFPPYDRMDIRDRR 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,904
Number of Sequences: 336
Number of extensions: 2012
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)