Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0641.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    27   0.47 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   0.62 
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   3.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.3  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    24   3.3  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    24   3.3  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   5.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   5.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   5.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   5.8  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 240 LLDREVQQQAKYVMLNPSSK-LKGEKDWQKYETARKLHKCIDKI 368
           L+++ VQ+      +  ++K  KG  DW  Y T  ++H  +D++
Sbjct: 101 LIEQNVQRAFDEERVRLTNKRAKGPFDWNDYHTLEEIHAWLDQL 144


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = +1

Query: 46  IGNFRIEPPGLFRGRGEHPKMGKLKRRV----MPEDVL 147
           + NFR  P GLFR   E  K+    +RV    +P D+L
Sbjct: 287 VNNFRTLPDGLFRANRELRKVKLASQRVELETLPHDLL 324


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 278 DILSLLLNFSVQEANHVTVLSCLTSLHLCPEG 183
           DI++ LL F   + + VT+   L    L PEG
Sbjct: 159 DIIARLLPFITHKGDRVTLNKPLDPARLLPEG 190


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 167  LSFEQLIKTSSGITRLFNFPIFGCS 93
            +SF   +K  SG+  ++NF  FG S
Sbjct: 1771 MSFFMHVKDKSGLDDVYNFKTFGQS 1795


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 100 PKMGKLKRRVMPEDVLINCSKDSKIPK 180
           P  GK  +R++PE +   C++ S I K
Sbjct: 61  PPEGKDLKRILPEALRTKCARCSPIQK 87


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 100 PKMGKLKRRVMPEDVLINCSKDSKIPK 180
           P  GK  +R++PE +   C++ S I K
Sbjct: 61  PPEGKDLKRILPEALRTKCARCSPIQK 87


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 225 SYMVSLLDREVQQQAKYVMLNPSSKLKGEKD 317
           S+M  L+D   Q + K  +LN S     E+D
Sbjct: 108 SFMEELMDEVAQPELKLNLLNESDFTFSERD 138


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 225 SYMVSLLDREVQQQAKYVMLNPSSKLKGEKD 317
           S+M  L+D   Q + K  +LN S     E+D
Sbjct: 108 SFMEELMDEVAQPELKLNLLNESDFTFSERD 138


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 225 SYMVSLLDREVQQQAKYVMLNPSSKLKGEKD 317
           S+M  L+D   Q + K  +LN S     E+D
Sbjct: 108 SFMEELMDEVAQPELKLNLLNESDFTFSERD 138


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 225 SYMVSLLDREVQQQAKYVMLNPSSKLKGEKD 317
           S+M  L+D   Q + K  +LN S     E+D
Sbjct: 108 SFMEELMDEVAQPELKLNLLNESDFTFSERD 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,546
Number of Sequences: 2352
Number of extensions: 8223
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)