Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0640.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.82 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   1.4  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   4.4  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   4.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 154 EVEQRVHNRQGHEGVHLAAARQGHPPHHR 68
           E +QR  + Q H G   AAA    PP HR
Sbjct: 896 EQQQRSSSSQQHRGPGAAAATGPPPPTHR 924


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 178  LHGTHLRHEVEQRVHNRQGHEGVHLAAA 95
            L+ +HL H +    H+  G EGV +  A
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPA 1336


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = +3

Query: 48  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP 173
           C  P P++       +    C P C C+      T +  CVP
Sbjct: 34  CCAPCPQKACISEAVKCQTSCLPGCVCKKGFVRETQFGNCVP 75


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 354 YQSQRFHPVRHCNYEDYGLHQV*VWELVYDHGRRNLGRV-GTIVS 223
           + +Q +HP        +G   V VW   + HG   L R+ GT+ S
Sbjct: 162 FPNQAYHPKNTIKTLSHGGGHVMVWGCFFWHGTGPLFRINGTLNS 206


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 369 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 458
           AD AA +RY   +  +  RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 85   HPPHHRRGAGQAHRSQGRRAVG 20
            HP HH  G+G++ +  G   VG
Sbjct: 1402 HPHHHHNGSGRS-KPPGPEGVG 1422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,018
Number of Sequences: 2352
Number of extensions: 12297
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)