Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0640.Seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 117 4e-27
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.002
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.087
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 1.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 1.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 3.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 3.3
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 5.7
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 5.7
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 5.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 27 7.6
U21308-5|AAB93318.1| 258|Caenorhabditis elegans Warthog (hedgeh... 27 7.6
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 27 7.6
AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid deplete... 27 7.6
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 27 10.0
U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical pr... 27 10.0
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 117 bits (282), Expect = 4e-27
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = -2
Query: 276 LVYDHGRRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 97
L Y G RN+GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +SLP
Sbjct: 179 LAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLP 238
Query: 96 RGKGIRLTIAEERDKRIAAK 37
G GIRL+IAEERDKR+A K
Sbjct: 239 TGAGIRLSIAEERDKRMAQK 258
Score = 91.9 bits (218), Expect = 2e-19
Identities = 44/73 (60%), Positives = 51/73 (69%)
Frame = -3
Query: 473 ITPEEAKYKLCKVKRVTTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 294
I EA +KLCKVK V T K VP L T DGRTIRYPDP +KVND+I +I+T KI D +
Sbjct: 113 IQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSV 172
Query: 293 KFESGNLCMITXG 255
KFE GNL +T G
Sbjct: 173 KFEPGNLAYVTGG 185
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 56
HHR E AH G HGTH H E H+ H G H + H P H G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459
Query: 55 QAHRS 41
+ H +
Sbjct: 460 EHHHA 464
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 71
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = -1
Query: 244 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHR 68
A HH E H H G HGTH H GH G H A A GH H
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGE 521
Query: 67 RGAGQAHRSQGRRA 26
G H + A
Sbjct: 522 HGTHHGHHGEHHHA 535
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -1
Query: 196 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 47
H AH HG H RH E H+ H G H H HH A H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441
Score = 33.9 bits (74), Expect = 0.066
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 6/73 (8%)
Frame = -1
Query: 247 GACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAARQGHPP 77
G+ G H T L H H G HGTH H H+ HE G H A H
Sbjct: 649 GSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDD 708
Query: 76 ---HHRRGAGQAH 47
HH G H
Sbjct: 709 KENHHHHGHHSKH 721
Score = 33.5 bits (73), Expect = 0.087
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 56
HH P H G HG H H GH G H H P H G
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHH 689
Query: 55 QAHRSQG 35
AH G
Sbjct: 690 GAHHEHG 696
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 56
HH P H H HG H H H G G H H P H G
Sbjct: 509 HHHAPAHHGH---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHG 565
Query: 55 QAHRS 41
+ H +
Sbjct: 566 EHHHA 570
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = -1
Query: 238 GHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 62
GHH H H G HG H H H+ GH G H A H HH
Sbjct: 588 GHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH--GHHGAHHHHA--PHHEHHEHH 643
Query: 61 AGQAHRSQG 35
H S G
Sbjct: 644 GDHHHGSHG 652
Score = 32.3 bits (70), Expect = 0.20
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 68
HH E H H G HG+ H HE H+ H G H H HH
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617
Query: 67 RGAGQAHRSQG 35
G G H G
Sbjct: 618 AGYGAHHGHHG 628
Score = 30.3 bits (65), Expect = 0.81
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = -1
Query: 190 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 47
AH G HG H H H G H G H GH H A H
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 59
HH P H HG H H GH G H + A G H HH A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514
Query: 58 GQAHRSQ 38
H +
Sbjct: 515 HHGHHGE 521
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = -1
Query: 190 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 38
AH G HG H H G GVH + H H A H +
Sbjct: 559 AHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 196 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH-RRGAGQAH 47
H H G H +H H G GVH G+ HH GA H
Sbjct: 583 HGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHH 633
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Frame = -1
Query: 238 GHHRVPRETSRLLRHCAHQGLH----GTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 71
G H P H H G H H HE H+ H G H H P H
Sbjct: 411 GTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHH---GEHHHAPAH 467
Query: 70 RRGAGQAHRS 41
G+ H +
Sbjct: 468 HGHHGEHHHA 477
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/68 (25%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = -1
Query: 235 HHRVPRETSRLLRHCAHQGLHG---THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 65
HH P H H G HG + H H+ H G H G H
Sbjct: 532 HHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHE 591
Query: 64 GAGQAHRS 41
G H +
Sbjct: 592 SHGHGHHA 599
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Frame = -1
Query: 208 RLLRHCAHQGLHGT-HLRHEVE-QRVHNRQGHEG-------VHLAAARQGHPPHHRRGAG 56
+L R A LH HL E+ Q+V + H+G + + GH HH GA
Sbjct: 30 KLTRDEARSALHDIEHLAKELHFQKVFDHHAHDGHISLKGFLSFISPHHGHHTHHAHGAH 89
Query: 55 QAH 47
H
Sbjct: 90 PGH 92
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.087
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 196 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 35
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
Score = 29.5 bits (63), Expect(2) = 0.22
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 196 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 71
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 181 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 32
G HG H RH R GH G +R G P G H GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333
Score = 21.4 bits (43), Expect(2) = 0.22
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 82 PPHHRRGAGQAHRSQGRRA 26
PPH R G H G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 48 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 167
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 48 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 167
C C PR C CR C +C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 48 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 167
C C PR C CR C +C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 48 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 167
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 84 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 173
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 211 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 35
+R RH H+G HG ++H H H R G H P+ H +
Sbjct: 84 ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143
Query: 34 RRAV 23
+R++
Sbjct: 144 KRSI 147
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 48 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 167
C C P+ C CR C +C C TRC T R C
Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 139 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 44
VH+ H+G H R+ H HH G H+
Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = -1
Query: 187 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 62
H G TH H+ + GH G H + + H H G
Sbjct: 43 HHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 89 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 205
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 89 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 205
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 236 APSCPARDIPAPSTLCTSRTPRDTPSP 156
AP CP PAP+ C P TPSP
Sbjct: 107 APCCPPP--PAPAAPCCPPPPPPTPSP 131
>Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical
protein F35E8.6 protein.
Length = 272
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -3
Query: 320 ATTKIMDFIKFESGNLCMITXGVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSP 156
A +MD IK ++ ++C + G A +CP + PS C+ TP SP
Sbjct: 83 AAGAVMDDIKADAISICPKSCGYCCETSAYNCPNAAL--PSIDCSKVTPTQCKSP 135
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 431 RVTTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 294
R T+ P N + T T R P P+ ++ ++ ++ K MDF+
Sbjct: 372 RTTSKPDNTFWHPTESFGTTRSPAPVSTIDSPLKPEVPVIKPMDFM 417
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 431 RVTTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 294
R T+ P N + T T R P P+ ++ ++ ++ K MDF+
Sbjct: 372 RTTSKPDNTFWHPTESFGTTRSPAPVSTIDSPLKPEVPVIKPMDFM 417
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 378 HHPLPRPTYQSQRFHPVRHCNYEDYGLH 295
HH PTY F+P H +Y+ + L+
Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59
>U21308-5|AAB93318.1| 258|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 10 protein.
Length = 258
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3
Query: 144 CSTSWRRCVPWSP*CAQCRRSRDVSRGTRWCPHAPSYAXRDHTQVPRLKL 293
C +RC+ CR DV G RW P+ S R T + K+
Sbjct: 54 CGEVGKRCIDDQ---TSCRAETDVFSGMRWAPNGESILLRCCTMHAKNKI 100
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 211 SRLLRHCA--HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH 83
S LL CA H G+ L+H V + G +HLAA GH
Sbjct: 842 SPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHLAAF-NGH 885
>AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid depleted
protein 5 protein.
Length = 176
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = -3
Query: 428 VTTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 300
++TG N+P +HD + + D L K + + +++ + MD
Sbjct: 20 LSTGKDNLPVTRSHDAKKVELNDILDKPSQKTPVKVSSDETMD 62
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = -1
Query: 181 GLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 47
G H H E HN H +H + G P R A H
Sbjct: 422 GSHEAHAHSATEHGAHNHSEHHQLHRSIFHHGAPTSIRSQAQVPH 466
>U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical
protein C41G11.4c protein.
Length = 557
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 214 SLAGHDGAHTPQVTPXVIIHKFPDSNLMKSII 309
SL GH G TP+ + H P L+ SI+
Sbjct: 462 SLGGHSGYSTPERSVEGFYHALPQFGLLGSIL 493
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,001,421
Number of Sequences: 27780
Number of extensions: 271445
Number of successful extensions: 968
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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