Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0635.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p pro...    29   2.9  
AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB...    29   2.9  
AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA...    29   2.9  
AY051520-1|AAK92944.1|  536|Drosophila melanogaster GH17801p pro...    28   5.0  
AE014134-281|AAF51348.3|  536|Drosophila melanogaster CG17660-PA...    28   5.0  
AE013599-897|AAS64888.1|  319|Drosophila melanogaster CG33479-PA...    28   6.7  

>AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p
           protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 7/35 (20%)
 Frame = +1

Query: 4   LHKMETTRAEMETWLDWCV-------RKNDIKQLW 87
           L K+E T AE E WL W         R N+++Q W
Sbjct: 193 LKKVEQTTAEKEAWLSWAAGYPYIWRRYNELRQRW 227


>AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB,
           isoform B protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 7/35 (20%)
 Frame = +1

Query: 4   LHKMETTRAEMETWLDWCV-------RKNDIKQLW 87
           L K+E T AE E WL W         R N+++Q W
Sbjct: 193 LKKVEQTTAEKEAWLSWAAGYPYIWRRYNELRQRW 227


>AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA,
           isoform A protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 7/35 (20%)
 Frame = +1

Query: 4   LHKMETTRAEMETWLDWCV-------RKNDIKQLW 87
           L K+E T AE E WL W         R N+++Q W
Sbjct: 193 LKKVEQTTAEKEAWLSWAAGYPYIWRRYNELRQRW 227


>AY051520-1|AAK92944.1|  536|Drosophila melanogaster GH17801p
           protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 85  WAAQPTYIISQAVYVLAGLLTLFHAFKKGGRW--PYFWLGTVL 207
           W   P Y+I   VYV+ G++ LF +F +        FW+G V+
Sbjct: 199 WPFLPFYLIMCIVYVIFGIIWLFVSFAQWRDLLRIQFWIGGVI 241


>AE014134-281|AAF51348.3|  536|Drosophila melanogaster CG17660-PA
           protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 85  WAAQPTYIISQAVYVLAGLLTLFHAFKKGGRW--PYFWLGTVL 207
           W   P Y+I   VYV+ G++ LF +F +        FW+G V+
Sbjct: 199 WPFLPFYLIMCIVYVIFGIIWLFVSFAQWRDLLRIQFWIGGVI 241


>AE013599-897|AAS64888.1|  319|Drosophila melanogaster CG33479-PA
           protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +1

Query: 142 LTLFHAFKKGGRWPYF-WLG 198
           LTL HAF+   + PYF W+G
Sbjct: 138 LTLLHAFESNAQCPYFKWMG 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,781,883
Number of Sequences: 53049
Number of extensions: 451154
Number of successful extensions: 1151
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)