Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0635.Seq
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37140-2|CAA85502.1|  452|Caenorhabditis elegans Hypothetical pr...    61   4e-10
Z36948-3|CAA85412.1|  421|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical p...    27   4.8  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    27   4.8  
Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali...    27   6.3  
Z46795-2|CAB54311.1|  932|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z46795-1|CAA86788.1|  924|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical...    27   8.3  
AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical...    27   8.3  
AF047658-4|AAC04417.1|  392|Caenorhabditis elegans Hypothetical ...    27   8.3  

>Z37140-2|CAA85502.1|  452|Caenorhabditis elegans Hypothetical
           protein ZK899.2 protein.
          Length = 452

 Score = 60.9 bits (141), Expect = 4e-10
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +3

Query: 243 IARVDNFWHSQTPIIFLGARLPLHIILX-YPAFIYHAAYAVSKLNLPRYAEPFAVGLVTV 419
           I  +DNFW +Q  + F GAR PL+I++  Y  F Y +   +S+L+LP +A   AVGL  V
Sbjct: 101 IPDMDNFWQAQGILTFFGARAPLYILIGIYHMFDYTSFVLMSRLHLPWWAYGPAVGLGAV 160

Query: 420 LXDIPYDIV 446
           + D+PYDI+
Sbjct: 161 MLDMPYDIM 169



 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 34/67 (50%)
 Frame = +1

Query: 43  WLDWCVRKNDIKQLWAAQPTYIISQAVYVLAGLLTLFHAFKKGGRWPYFWLGTVLHGIYA 222
           W DW  +   +  ++    +++  + ++ L   LT  HA++ G R+   W G ++H +  
Sbjct: 35  WFDWICKYQPVSTIYENHTSFLFGEILFFLLAGLTFAHAWRSGTRFVLVWFGILVHALNV 94

Query: 223 DNFWHFV 243
           +N  +++
Sbjct: 95  ENLCYWI 101


>Z36948-3|CAA85412.1|  421|Caenorhabditis elegans Hypothetical
           protein D2089.5 protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 359 SLKAESSTLRGAFRGGLGYCTDXHSLRH 442
           SLKA++S +  A  GGL + TD  SL H
Sbjct: 203 SLKADASNMAYASNGGLPFHTDFPSLSH 230


>Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical
           protein C08H9.4b protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 135 SQNVNGL-RYYICRLGSPQLLDVIFS 61
           S+NV+ + +YYIC+ G P   ++I S
Sbjct: 311 SRNVDEIMKYYICKTGQPSKFNIIIS 336


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -2

Query: 307 GNRAPRNMIGVCECQKLSTLAIRNARSYLRKSHEVRYRAK 188
           G+R+ R ++  C C +  +  I+     + K H ++Y+ K
Sbjct: 524 GHRSKRGILSKCSCSRNVSHPIKLLEQKMSKKHYLKYKKK 563


>Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical
           protein ZK938.6 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 135 SQNVNGL-RYYICRLGSPQLLDVIFS 61
           S+NV+ + +YYIC+ G P   ++I S
Sbjct: 306 SRNVDEIMKYYICKTGQPSKFNIIVS 331


>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
            pathway homologprotein 1 protein.
          Length = 1451

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 95   WAAHNCLMSFFRTHQSNHVS 36
            W+A   +  F RTH+SN VS
Sbjct: 1055 WSADKAIQQFGRTHRSNQVS 1074


>Z46795-2|CAB54311.1|  932|Caenorhabditis elegans Hypothetical
           protein T19E10.1b protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +1

Query: 43  WLDWCVRKNDIKQLWAAQPTYIISQAVYVLAGLLTLFHAFKK 168
           W+  C +  D       +P ++    + V  GL   FH FK+
Sbjct: 182 WVTECWKHRDDSYFDVMEPCFVDKHRLGVFEGLSLFFHGFKQ 223


>Z46795-1|CAA86788.1|  924|Caenorhabditis elegans Hypothetical
           protein T19E10.1a protein.
          Length = 924

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +1

Query: 43  WLDWCVRKNDIKQLWAAQPTYIISQAVYVLAGLLTLFHAFKK 168
           W+  C +  D       +P ++    + V  GL   FH FK+
Sbjct: 182 WVTECWKHRDDSYFDVMEPCFVDKHRLGVFEGLSLFFHGFKQ 223


>AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18b protein.
          Length = 381

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 337 NAGYXKIICRGNRAPRNMIGVCECQKLSTLAIRNARSYLRKSHEVRYRAKNKAIF 173
           NAG+  +    + +PR +IG+   + L  +A +N R Y    HE     K  A F
Sbjct: 161 NAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRHYC--DHETEVSGKFPASF 213


>AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18a protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 337 NAGYXKIICRGNRAPRNMIGVCECQKLSTLAIRNARSYLRKSHEVRYRAKNKAIF 173
           NAG+  +    + +PR +IG+   + L  +A +N R Y    HE     K  A F
Sbjct: 158 NAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRHYC--DHETEVSGKFPASF 210


>AF047658-4|AAC04417.1|  392|Caenorhabditis elegans Hypothetical
           protein K03H6.1 protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  KQLWAAQPTYIISQAVYVLAGLLTLFHAFK 165
           K  W      ++  +++V  GLLT++H F+
Sbjct: 148 KLYWQRGKMVVVLSSIFVTTGLLTVYHHFE 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,230,275
Number of Sequences: 27780
Number of extensions: 237219
Number of successful extensions: 532
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)