Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0634.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.5  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   2.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   3.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   6.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   6.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 119 IVNFNHFL*KFSVTINFVRCCLHY 48
           +V F HF+  F +TIN  +  L+Y
Sbjct: 26  LVTFAHFICLFPITINIRKNGLNY 49


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 279 CRHLPSDISSKVSAFTVQRLPHPSN 353
           C  +PS++  K + + +   PH  N
Sbjct: 335 CSQIPSEVEDKYTTYFLNTYPHLFN 359


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 339 PHPSNRNALITASWQ 383
           P+PS  N LI  +W+
Sbjct: 477 PNPSEENPLINVTWK 491


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 131 LNQFIVNFNHFL*KFSVTINFVRCCLHYF 45
           ++ F+  F+H     S+ +N VR C   F
Sbjct: 183 VDPFMTGFSHRNQPTSIDLNAVRLCFQVF 211


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 339 PHPSNRNALITASWQ 383
           P+P+  N LI  +W+
Sbjct: 477 PNPTEENPLINVTWK 491


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 339 PHPSNRNALITASWQ 383
           P+P+  N LI  +W+
Sbjct: 477 PNPTEENPLINVTWK 491


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 80  TINFVRCCLHYFQYDLLYLLLE 15
           T+ + +  +H+F   LLYL+ +
Sbjct: 151 TVEYFQNYIHFFYQLLLYLITD 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,152
Number of Sequences: 336
Number of extensions: 1990
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)