Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0634.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY221751-1|AAO67709.1|  498|Homo sapiens myocardial ischemic pre...    29   6.8  
M74018-1|AAA58969.1|  139|Homo sapiens immunoglobulin heavy chai...    29   9.0  
BC022387-1|AAH22387.1|  542|Homo sapiens solute carrier family 2...    29   9.0  
AB042505-1|BAB47393.1|  542|Homo sapiens organic anion transport...    29   9.0  

>AY221751-1|AAO67709.1|  498|Homo sapiens myocardial ischemic
           preconditioning upregulated protein 2 protein.
          Length = 498

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +3

Query: 333 RLPHPSN---RNALITASWQKWAADSQEVLPPVISQIIILRV*FLL 461
           RL HPS    RN ++   W K   D  E+ P V S   I+R+ FLL
Sbjct: 7   RLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVRMKFLL 52


>M74018-1|AAA58969.1|  139|Homo sapiens immunoglobulin heavy chain V
           region protein.
          Length = 139

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 409 TSCESAAHFCHEAVINAFRFDGWG 338
           T+ ++A ++C  A++ A+ FD WG
Sbjct: 103 TAADTAVYYCARALMTAYYFDYWG 126


>BC022387-1|AAH22387.1|  542|Homo sapiens solute carrier family 22
           (organic anion transporter), member 8 protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 159 IKFTINVIVFVFFLSIRYVDELVAHLVLSG 248
           ++ T+++  FVFFLS  +  E +  LVLSG
Sbjct: 238 LQLTVSIPFFVFFLSSWWTPESIRWLVLSG 267


>AB042505-1|BAB47393.1|  542|Homo sapiens organic anion transporter
           3 protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 159 IKFTINVIVFVFFLSIRYVDELVAHLVLSG 248
           ++ T+++  FVFFLS  +  E +  LVLSG
Sbjct: 238 LQLTVSIPFFVFFLSSWWTPESIRWLVLSG 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,041,234
Number of Sequences: 237096
Number of extensions: 1080324
Number of successful extensions: 2217
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2217
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)