Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0632.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 139 DYCPTSRCDDQSSC 180
           D+C T+ C++Q++C
Sbjct: 101 DWCSTNPCENQATC 114


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +3

Query: 273 ECPPFDCDGDNEEYNPCPPLCPGE 344
           ECP   CD        C   CPG+
Sbjct: 88  ECPEPTCDEPVHRPGRCCKTCPGD 111


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 137 LITVQRADAMTSQAVRSLRAPTVQRQPANVDS 232
           L TV+    +  +AV SLRA   Q  PA++++
Sbjct: 98  LATVEET-VVRDKAVESLRAVAQQHSPADLEN 128


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 489 IPYIVRMAHRLRPVSRSTFYIYRLVCTAIRCLFF 388
           IP+I ++      + +S ++IY  V +  +CL F
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFV-SVWKCLLF 310


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 489 IPYIVRMAHRLRPVSRSTFYIYRLVCTAIRCLFF 388
           IP+I ++      + +S ++IY  V +  +CL F
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFV-SVWKCLLF 310


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 489 IPYIVRMAHRLRPVSRSTFYIYRLVCTAIRCLFF 388
           IP+I ++      + +S ++IY  V +  +CL F
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFV-SVWKCLLF 310


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 489 IPYIVRMAHRLRPVSRSTFYIYRLVCTAIRCLFF 388
           IP+I ++      + +S ++IY  V +  +CL F
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFV-SVWKCLLF 310


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 324 GRDCTLHYH 298
           GR CTLH+H
Sbjct: 576 GRICTLHHH 584



 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 324 GRDCTLHYH 298
           G+ CTLH+H
Sbjct: 852 GKICTLHHH 860


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +1

Query: 52  AKADATDDVTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCPA 210
           A +    DV  P    S  + + P++C     P SRC+ + S        CP+
Sbjct: 52  AASPTPGDVPTPSSPRS--ISEDPLNCRD--LPNSRCNSRESSDSLVQPRCPS 100


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 291 CDGDNEEYNPCP 326
           C+G+ + + PCP
Sbjct: 937 CEGERKHHMPCP 948


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 196 RSQASDSLTGHRIGSLDSNQKDSPR 122
           R    +S TG+ +GS  +N   SP+
Sbjct: 77  RPMHQNSYTGYHLGSYAANCPPSPK 101


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 382 RWHSPSSVACEQLSPGQRGGQGLYSSLS 299
           R H P+SVA      G   G+G    LS
Sbjct: 109 RQHIPASVAAAFAPQGPSTGRGASKKLS 136


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 324 GRDCTLHYH 298
           G+ CTLH+H
Sbjct: 220 GKICTLHHH 228


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 449 SPEVLFTSTGWFARQYDAYSSNTMALPILRRLRTALTGAE 330
           SP V      W   +     S+     + RRLRTA T  +
Sbjct: 107 SPGVNVPEYPWMKEKKTTRKSSQQENGLPRRLRTAYTNTQ 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,138
Number of Sequences: 336
Number of extensions: 3026
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)