Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0632.Seq
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62870.1 68414.m07099 expressed protein 31 0.43
At1g32190.1 68414.m03959 expressed protein 31 0.43
At3g46050.1 68416.m04983 kelch repeat-containing F-box family pr... 30 0.75
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 30 0.75
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 30 1.00
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 30 1.00
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 30 1.00
At2g31955.1 68415.m03903 molybdopterin biosynthesis protein, put... 29 1.3
At2g22140.1 68415.m02630 expressed protein ; expression supporte... 28 3.0
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 28 4.0
At3g29210.1 68416.m03664 hypothetical protein similar to At1g328... 28 4.0
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 28 4.0
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 28 4.0
At4g11910.1 68417.m01894 expressed protein hypothetical protein ... 27 5.3
At3g27580.1 68416.m03446 protein kinase, putative similar to ser... 27 5.3
At5g54370.1 68418.m06770 late embryogenesis abundant protein-rel... 27 7.0
At1g69100.1 68414.m07907 aspartyl protease family protein contai... 27 7.0
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 27 9.3
At4g21590.1 68417.m03126 bifunctional nuclease, putative similar... 27 9.3
At3g22640.1 68416.m02858 cupin family protein contains similarit... 27 9.3
At2g18470.1 68415.m02151 protein kinase family protein contains ... 27 9.3
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 375 TPHPPSPANSSHRGREGGRDCTLHYHRHN 289
+P PP P +SSHR R L++H H+
Sbjct: 120 SPSPPPPPSSSHRKRNSSAVEALNHHHHH 148
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 145 CPTSRCDDQSSCPKPASADCPAPACKC 225
C + C SCPKP CP P+C C
Sbjct: 296 CCSGLCRPSCSCPKPR---CPKPSCSC 319
Score = 26.6 bits (56), Expect = 9.3
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +3
Query: 291 CDGDNEEYNPCP-PLCPGESCSQATEDGECHRVGRIGIVLPCKPAC-RCKKYFWRQDGVC 464
C G CP P CP SCS G+C G P C C K C
Sbjct: 297 CSGLCRPSCSCPKPRCPKPSCSCGCGCGDC---GCFKCSCPTLKGCFSCCKKPSCVSSCC 353
Query: 465 VPYEQCKEC 491
P +C C
Sbjct: 354 CPTFKCSSC 362
>At3g46050.1 68416.m04983 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 370
Score = 30.3 bits (65), Expect = 0.75
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 460 TPSCLQKY--FLHLQAGLHGNTMPILPTRWHSPSSVACEQLSP 338
T SC+ K FL++ LH N P P RW S + ++L P
Sbjct: 60 TRSCIGKTESFLYVCLDLHRNCYPDCPPRWFIVSPITKQKLKP 102
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 30.3 bits (65), Expect = 0.75
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Frame = +3
Query: 273 ECPPFD-CDGDNEEYNPCPPLCPGESCSQATEDGECHRVGRIGIVLP-CKPA----CRCK 434
ECP D + Y C P P CS +G+C R G+ C + CRC
Sbjct: 444 ECPVVDGVQYKGDGYTSCKPYGPAR-CSM--NNGDCWSETRKGLTFSSCSDSETSGCRCP 500
Query: 435 KYFWRQDGVCVPYEQCKE---CSC 497
F C ++CKE C C
Sbjct: 501 LGFLGDGLKCEDIDECKEKSACKC 524
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 76 VTEPPCADSEILD-KCPVDCPSDYCPTSRCDDQSSCPKPASADCPAPACKCRFNY 237
+T C+DSE +CP+ D +C+D C K SA C CKC+ N+
Sbjct: 484 LTFSSCSDSETSGCRCPLGFLGDGL---KCEDIDEC-KEKSA-CKCDGCKCKNNW 533
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 29.9 bits (64), Expect = 1.00
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +1
Query: 79 TEPPCADSEILD-KCPVDCPSDYCPTSRCDDQSSCPKPASADCPAPACKCR 228
T C D D KCP+ D C+D C + C P CKC+
Sbjct: 484 TYSACVDDHSKDCKCPLGFKGD--GVKNCEDVDECKEKTVCQC--PECKCK 530
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.9 bits (64), Expect = 1.00
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 91 CADSEILDKCPVDCPSDYCP--TSRCDDQSSCPKPASADCPAPACK 222
C D + + KC +CP + T +C+D + C + + CP +CK
Sbjct: 493 CVDKDSV-KC--ECPPGFKGDGTKKCEDINECKEKKACQCPECSCK 535
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.9 bits (64), Expect = 1.00
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 91 CADSEILDKCPVDCPSDYCP--TSRCDDQSSCPKPASADCPAPACK 222
C D + + KC +CP + T +C+D + C + + CP +CK
Sbjct: 493 CVDKDSV-KC--ECPPGFKGDGTKKCEDINECKEKKACQCPECSCK 535
>At2g31955.1 68415.m03903 molybdopterin biosynthesis protein,
putative / molybdenum cofactor biosynthesis enzyme,
putative 3' fragment; strong similarity to SP|Q39055
Molybdopterin biosynthesis CNX2 protein (Molybdenum
cofactor biosynthesis enzyme CNX2) {Arabidopsis
thaliana}
Length = 390
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 344 LTGAERGAGIVLFIITVTIKGRAFSSRYACPLVARL 237
L G+E G+G V IT T R FSS YA V ++
Sbjct: 22 LVGSEVGSGSVTRTITTTTSERLFSSSYAAHQVDQI 57
>At2g22140.1 68415.m02630 expressed protein ; expression supported
by MPSS
Length = 506
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 220 CRLALDSRRSQASDSLTGHRIGSLDSNQKDSPR 122
C + S D +G RI SLDS +DSPR
Sbjct: 69 CSFGSRALASNREDKFSGKRIISLDSEFEDSPR 101
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 171 VKLSEACERRLSSASLQM*IQLQTRNQRTCIPT 269
V SEAC +L+S S ++L N+R C+ T
Sbjct: 802 VDFSEACPTKLASGSDDCSVKLWNINERNCLGT 834
>At3g29210.1 68416.m03664 hypothetical protein similar to At1g32840,
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At2g02210,
At3g32900
Length = 594
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 192 ERRLSSASLQM*IQLQTRNQRTCIPTRECPPFDCDGDNEEYNPCP 326
++++ SA + + + + +N++ I + D DGDN+++ P P
Sbjct: 507 QKQVDSADVDVPTRKEAQNKKRKIIGNDGDNADNDGDNDDFQPAP 551
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 91 CADSEILDKCPVDCPSDYCP--TSRCDDQSSCPKPASADCPAPACK 222
C D + + KC +CP + +C+D + C + + CP +CK
Sbjct: 493 CVDKDSV-KC--ECPPGFKGDGVKKCEDINECKEKKACQCPECSCK 535
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 91 CADSEILDKCPVDCPSDYCP--TSRCDDQSSCPKPASADCPAPACK 222
C D + + KC +CP + +C+D + C + + CP +CK
Sbjct: 493 CVDKDSV-KC--ECPPGFKGDGVKKCEDINECKEKKACQCPECSCK 535
>At4g11910.1 68417.m01894 expressed protein hypothetical protein
F7H19.100 -Arabidopsis thaliana,PID:e1310060
Length = 466
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 309 EYNPCPPLCP-GESCSQATEDGECHRVGRIGIVLPCKPACRC 431
EYN P E+ SQ DG H+ LPC C+C
Sbjct: 191 EYNKVECWGPLWEAMSQHQHDGRTHKKSETLPELPCPDECKC 232
>At3g27580.1 68416.m03446 protein kinase, putative similar to
serine/threonine protein kinase [Arabidopsis thaliana]
gi|217861|dbj|BAA01715
Length = 578
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 136 SDYCPTSRCDDQSSCPKPASADCPAPAC 219
S YC C DQSSC DC P C
Sbjct: 351 SSYCIQPTCVDQSSC--IVQPDCIQPVC 376
>At5g54370.1 68418.m06770 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein (GI:1350543)[Picea
glauca]
Length = 337
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 115 KCPVDCPSDYCPTSRCDDQSSCPKPASADCPAPACKCRFNYRR 243
+CP +CPS S+ K ADC P CK + R+
Sbjct: 42 RCPEECPSKTAMNSK-------NKVCYADCDRPTCKSQCRMRK 77
>At1g69100.1 68414.m07907 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 343
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 328 GGQGLYSSLSPSQSKGGHSLVGMHV---RWLRVCS*IYI 221
GGQ ++ P Q KG H V M + RW S IYI
Sbjct: 177 GGQIMFGGFDPKQFKGEHVYVPMKLSDDRWKIKMSKIYI 215
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 390 FQHDGTPHPPSPANS-SHRGREGGRDCTLHYHRHN 289
F+ P PPS S + G D H HRHN
Sbjct: 12 FRWKSPPQPPSQEQPISDSDSDSGSDSENHQHRHN 46
>At4g21590.1 68417.m03126 bifunctional nuclease, putative similar to
bifunctional nuclease [Zinnia elegans]
gi|4099833|gb|AAD00694
Length = 294
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 166 DQSSCPKPASADCPAPACKCRFNYRRATNGHA---YRLENALPLI 291
+Q++CP P +++ ACK + YR AT G Y + LP++
Sbjct: 224 NQTACPNPYASESIDLACK--YAYRNATAGTTLGDYYFVSRLPVV 266
>At3g22640.1 68416.m02858 cupin family protein contains similarity
to vicilin-like protein precursor [Juglans regia]
GI:6580762, vicilin precursor [Theobroma cacao]
PIR|S22477, vicilin precursor [Macadamia integrifolia]
GI:5852872
Length = 486
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -1
Query: 424 QAGLHGNTMPILPTRWHSPSSVACEQLSPGQRGGQGLYSSLSPSQSK 284
Q+ +G T +L T ++ P + ++ + GQG+ +SP Q K
Sbjct: 200 QSYFNGFTKEVLSTSFNVPEELLGRLVTRSKEIGQGIIRRISPDQIK 246
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 58 ADATDDVTEP-PCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCPAP 213
A T+ + P P +++ P PS PT D SS P P S PAP
Sbjct: 8 APPTNSTSSPSPPSNTNSTTSSP-PAPSPPSPTPPQGDSSSSPPPDSTSPPAP 59
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,897,920
Number of Sequences: 28952
Number of extensions: 279467
Number of successful extensions: 926
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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