Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0631.Seq
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2... 38 0.027
BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2... 38 0.027
AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein p... 38 0.027
CR457175-1|CAG33456.1| 505|Homo sapiens HSPC117 protein. 29 9.3
CR456450-1|CAG30336.1| 505|Homo sapiens dJ149A16.6 protein. 29 9.3
BC016707-1|AAH16707.1| 505|Homo sapiens chromosome 22 open read... 29 9.3
BC010308-1|AAH10308.1| 505|Homo sapiens chromosome 22 open read... 29 9.3
BC002970-1|AAH02970.1| 505|Homo sapiens chromosome 22 open read... 29 9.3
AL050255-1|CAB43357.1| 505|Homo sapiens hypothetical protein pr... 29 9.3
AL021937-9|CAB38260.1| 505|Homo sapiens chromosome 22 open read... 29 9.3
AF155658-1|AAF67477.1| 505|Homo sapiens putative 55 kDa protein... 29 9.3
>BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 NQDXVPKALPYSHPXPIRRAPTVPAAP 417
N+D +P A+P +HP P +R PT PA P
Sbjct: 175 NEDFLPDAIPLAHPVPRQRRPTGPAGP 201
>BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 NQDXVPKALPYSHPXPIRRAPTVPAAP 417
N+D +P A+P +HP P +R PT PA P
Sbjct: 175 NEDFLPDAIPLAHPVPRQRRPTGPAGP 201
>AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein
protein.
Length = 441
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 NQDXVPKALPYSHPXPIRRAPTVPAAP 417
N+D +P A+P +HP P +R PT PA P
Sbjct: 177 NEDFLPDAIPLAHPVPRQRRPTGPAGP 203
>CR457175-1|CAG33456.1| 505|Homo sapiens HSPC117 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>CR456450-1|CAG30336.1| 505|Homo sapiens dJ149A16.6 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>BC016707-1|AAH16707.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>BC010308-1|AAH10308.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>BC002970-1|AAH02970.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>AL050255-1|CAB43357.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>AL021937-9|CAB38260.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
>AF155658-1|AAF67477.1| 505|Homo sapiens putative 55 kDa protein
protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 260 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 168
G YA+ +++ FLT VFNTT DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,358,982
Number of Sequences: 237096
Number of extensions: 1273953
Number of successful extensions: 2377
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2377
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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