Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0630.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   174   6e-44
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   174   6e-44
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   173   1e-43
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   173   1e-43
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   167   7e-42
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   4.6  
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    28   6.1  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    28   6.1  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    28   6.1  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    28   8.1  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  174 bits (423), Expect = 6e-44
 Identities = 75/80 (93%), Positives = 79/80 (98%)
 Frame = +3

Query: 15  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 195 QLSSEALEAGRICCNKYLVK 254
           QLSSEALEAGRICCNKYLVK
Sbjct: 72  QLSSEALEAGRICCNKYLVK 91



 Score =  162 bits (393), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 78/83 (93%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIGQXIMS 430
           K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTV RVRIGQ IMS
Sbjct: 91  KYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 150

Query: 431 VRSSDRWKAQVIEALXLAKFKFP 499
           VRSSDR+KAQVIEAL  AKFKFP
Sbjct: 151 VRSSDRYKAQVIEALRRAKFKFP 173


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  174 bits (423), Expect = 6e-44
 Identities = 75/80 (93%), Positives = 79/80 (98%)
 Frame = +3

Query: 15  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77

Query: 195 QLSSEALEAGRICCNKYLVK 254
           QLSSEALEAGRICCNKYLVK
Sbjct: 78  QLSSEALEAGRICCNKYLVK 97



 Score =  162 bits (393), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 78/83 (93%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIGQXIMS 430
           K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTV RVRIGQ IMS
Sbjct: 97  KYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 156

Query: 431 VRSSDRWKAQVIEALXLAKFKFP 499
           VRSSDR+KAQVIEAL  AKFKFP
Sbjct: 157 VRSSDRYKAQVIEALRRAKFKFP 179


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  173 bits (421), Expect = 1e-43
 Identities = 75/78 (96%), Positives = 78/78 (100%)
 Frame = +3

Query: 21  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 200
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 201 SSEALEAGRICCNKYLVK 254
           SSEALEAGRICCNKYLVK
Sbjct: 61  SSEALEAGRICCNKYLVK 78



 Score =  162 bits (393), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 78/83 (93%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIGQXIMS 430
           K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTV RVRIGQ IMS
Sbjct: 78  KYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 137

Query: 431 VRSSDRWKAQVIEALXLAKFKFP 499
           VRSSDR+KAQVIEAL  AKFKFP
Sbjct: 138 VRSSDRYKAQVIEALRRAKFKFP 160


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  173 bits (421), Expect = 1e-43
 Identities = 75/78 (96%), Positives = 78/78 (100%)
 Frame = +3

Query: 21  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 200
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 201 SSEALEAGRICCNKYLVK 254
           SSEALEAGRICCNKYLVK
Sbjct: 61  SSEALEAGRICCNKYLVK 78



 Score =  162 bits (393), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 78/83 (93%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIGQXIMS 430
           K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTV RVRIGQ IMS
Sbjct: 78  KYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 137

Query: 431 VRSSDRWKAQVIEALXLAKFKFP 499
           VRSSDR+KAQVIEAL  AKFKFP
Sbjct: 138 VRSSDRYKAQVIEALRRAKFKFP 160


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  167 bits (406), Expect = 7e-42
 Identities = 72/78 (92%), Positives = 76/78 (97%)
 Frame = +3

Query: 15  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 5   VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64

Query: 195 QLSSEALEAGRICCNKYL 248
           QLSSEALEAGRICCNK L
Sbjct: 65  QLSSEALEAGRICCNKML 82



 Score =  115 bits (277), Expect = 3e-26
 Identities = 56/61 (91%), Positives = 57/61 (93%)
 Frame = +2

Query: 317 NKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIGQXIMSVRSSDRWKAQVIEALXLAKFKF 496
           NKMLSCAGADRLQTGMRGAFGKPQGTV RVRIGQ IMSVRSSDR+KAQVIEAL  AKFKF
Sbjct: 79  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKF 138

Query: 497 P 499
           P
Sbjct: 139 P 139


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 219 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 79
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 3    HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
            H++ I  G R A CY   + + +P SR  R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 3   HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
           H++ I  G R A CY   + + +P SR  R V
Sbjct: 519 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 3    HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
            H++ I  G R A CY   + + +P SR  R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
           protein.
          Length = 1995

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 177 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 55
           P+ R V S   S+S  S P    G  D   PD+ SI++  Y C
Sbjct: 410 PAPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,026,659
Number of Sequences: 53049
Number of extensions: 546695
Number of successful extensions: 1655
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)