Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0629.Seq
(419 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57943| Best HMM Match : SCP (HMM E-Value=5.70048e-42) 33 0.096
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.51
SB_32477| Best HMM Match : DUF593 (HMM E-Value=0.41) 31 0.51
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 29 1.2
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 29 1.6
SB_52467| Best HMM Match : UCH (HMM E-Value=2.6e-23) 28 2.7
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 2.7
SB_45938| Best HMM Match : Troponin (HMM E-Value=1) 28 2.7
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 3.6
SB_46824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 27 4.8
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 27 4.8
SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066) 27 4.8
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0) 27 8.3
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18) 27 8.3
SB_30105| Best HMM Match : PLA2_B (HMM E-Value=1.7e-06) 27 8.3
SB_27754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 27 8.3
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_12722| Best HMM Match : Oxysterol_BP (HMM E-Value=1.2) 27 8.3
SB_5359| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11) 27 8.3
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_57943| Best HMM Match : SCP (HMM E-Value=5.70048e-42)
Length = 632
Score = 33.1 bits (72), Expect = 0.096
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 TKTGKRD-GSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEP 409
T KR G K + + K ESN++SREF+ ++ + ++ RD NR + SEP
Sbjct: 193 TPVHKRQFGEKDTKSEYKGKWESNRRSREFDKEDFKGNS-RDINRLWENRSEP 244
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.7 bits (66), Expect = 0.51
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 269 RDGSKSGVTVEREKSESNKKSREFENKEAESSTY 370
RDG GVT++ E N K RE ENK+ E Y
Sbjct: 2937 RDGQFRGVTIQLEADIENYK-RELENKDLECQGY 2969
>SB_32477| Best HMM Match : DUF593 (HMM E-Value=0.41)
Length = 214
Score = 30.7 bits (66), Expect = 0.51
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 269 RDGSKSGVTVEREKSESNKKSREFENKEAESSTY 370
RDG GVT++ E N K RE ENK+ E Y
Sbjct: 80 RDGQFRGVTIQLEADIENYK-RELENKDLECQGY 112
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 302 REKSESNKKSREFENKEAESSTYRDKNRSXNSGSEP 409
R+K E +K RE + E ESS R+K +S EP
Sbjct: 195 RKKREEARKRREEKLAEKESSKSRNKRKSKEQRDEP 230
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
RDRN+ + +++ K ER+K +K +E E +E E R+K R + S
Sbjct: 613 RDRNREKENDREREKEREKEKEKEERDKEREKEKEKEKE-REKEKEREREKERDRDKSS 670
>SB_52467| Best HMM Match : UCH (HMM E-Value=2.6e-23)
Length = 422
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 174 GSDDSDKNRGKDTDDKYSETGTNKSSERR 260
G +S+K TD++ SETG +SE+R
Sbjct: 384 GLKESEKGVDSGTDERMSETGEESASEQR 412
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 257 KTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
K GK+D S+S E+ K++ +K RE + KE + + ++ R E
Sbjct: 791 KKGKKDSSES----EKGKAKKQRKGREKKGKEIKKNDDEEEERDEEEDDE 836
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 230 DRNQ*IIRTK-TGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
D NQ I K TGK G ++EK+ S S + +++ ST KN + ++G++
Sbjct: 733 DANQENITGKMTGKNGSESPGGEPKKEKNVSQAASNVDKEQKSSGSTSDSKNTNSSNGNK 792
>SB_45938| Best HMM Match : Troponin (HMM E-Value=1)
Length = 185
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 296 VEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
+E + ES + R ENK AE+ Y D+ S E
Sbjct: 49 LEESERESRSRQRVLENKLAEAKAYNDQLESEREDME 85
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 251 RTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPHE 415
+TK G++ +ER+K+E +K R+ E +E++ ++K E E
Sbjct: 1032 KTKEGEKKMKDEQDEIERKKAEEEEKKRK-EEEESKKKDEKEKEEEDEDEEEEEE 1085
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETGTNKSSE 254
+D++DKN D +D Y+ G N +++
Sbjct: 264 NDNNDKNDNNDNNDNYNNNGNNDNND 289
Score = 27.1 bits (57), Expect = 6.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETGTNKSSE 254
+D++D N D +D Y GTN +++
Sbjct: 184 NDNNDNNDNYDNNDNYDNNGTNDNND 209
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 251 RTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
+T+ +K +ERE SE+N K+RE E + RD+ +GS+
Sbjct: 631 KTQVTTEVSTKQKDALERELSEANGKNRELEEACENLAGIRDELEKELAGSK 682
>SB_46824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = +2
Query: 257 KTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
K +D S + + + +N ++ +NK++ ++ R+KN + N+ S
Sbjct: 18 KRNSKDSSINKASYNNSINGNNNNNKSNDNKDSNNNNDRNKNNNNNNNS 66
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 189 DKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKNPNPTR 326
D+NRGKD + Y + N ++RR + + R+ S+ + P+R
Sbjct: 146 DRNRGKDRRENYDD---NYEADRRPSDRRSERSRSRRGEWDETPSR 188
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 257 KTGKRDGSKSGVTVEREKSESNKKSRE---FENKEAESSTYRDKNR 385
K K + + +R+KSE ++SRE K+ +SS +RDK +
Sbjct: 210 KAEKSERKREKEEKKRDKSEKRERSRERSKDRKKDRDSSKHRDKEK 255
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKNPNP 320
S ++N +D DD+ + + + S R+ R + + +G++P+P
Sbjct: 415 SRSRERNMARDRDDRRPPSRSRRDSSLRRQRSPLRNRSPRWRGRSPSP 462
>SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066)
Length = 443
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 251 RTKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKNRSXNSGSEP 409
R+++ R+ SK ++E K + K ++ + K+ E S +DK++ + +EP
Sbjct: 197 RSRSRDREKSKEPENEKKEDKRKDSAKSKGKDGDRKKREDSGKKDKDKENDKENEP 252
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 186 SDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQS 299
S + + KD+DD S + TN SS+ + +R + S
Sbjct: 163 SPEKKDKDSDDSSSNSNTNVSSDEKSPKADRKRPKTTS 200
>SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0)
Length = 1311
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKN 382
E+E E++KK+ E ENK+ S+ D +
Sbjct: 822 EKEGKEADKKTEEKENKDESSNKLTDND 849
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 213 DDKYSETGTNKSSERRQASVMARRAASQSKGKNPNPTR 326
D S +G +K RR++ + + ++S+SK PN R
Sbjct: 1303 DSSTSRSGVSKEPARRESFMDSLFSSSKSKSNQPNTKR 1340
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKNPNPTR 326
SDDSDK + D+ S T T ++E + S+ + P+ R
Sbjct: 897 SDDSDKTECQSDDNMQSNTETEPANEAQSPDQEVDNIECDSQKQQPSTRR 946
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKG 305
S D++++RGK + K ++ ++ ER + + ARR S+G
Sbjct: 1214 SHDAERSRGKGRNGKQTQRPKAQNKERDKHAKEARRKGILSEG 1256
>SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18)
Length = 530
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 171 TGSDDSDKNRGKDTDDKYSETGTNKS 248
TG+DD+D G TDD S TGT+ +
Sbjct: 483 TGTDDTDSPTG--TDDTDSHTGTDNT 506
>SB_30105| Best HMM Match : PLA2_B (HMM E-Value=1.7e-06)
Length = 380
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETGTNKSSERRQASVM 275
++DSD + D+D+K + +N ++ Q+ +M
Sbjct: 343 NEDSDDEQASDSDEKDAAKNSNGDDDKEQSKLM 375
>SB_27754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 177 SDDSDKNRGKDTDDKYSETG 236
+DD D N G D DD TG
Sbjct: 18 NDDGDNNNGDDEDDDLDNTG 37
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 290 VTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEP 409
V +E ++ KK E + + S RD+ S +SGS P
Sbjct: 1790 VQPNQEPNKRRKKPPHLETRLSASRANRDRGHSSSSGSPP 1829
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 269 RDGSKSGVTVE--REKSESNKKSREFENKEAESSTYRDKNRSXNS 397
+D S+S + E RE+ E KK+++ + +++ ++ + N+S +S
Sbjct: 241 KDSSESSIDSEDDRERKERKKKNKKEKKHKSKETSSSESNKSSDS 285
>SB_12722| Best HMM Match : Oxysterol_BP (HMM E-Value=1.2)
Length = 640
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +2
Query: 266 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+++G +G + +REK S++K + E++E + RD++R + H
Sbjct: 379 EKNGRSNG-SPKREKHRSDRKRDKEESRERDRDRDRDRDRDRDRDRGKH 426
>SB_5359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 281 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
K+ + EK E+N+K++ N + DKN+ N+ E
Sbjct: 6 KTDSKIAEEKPENNEKAQAEINNAGPTDAKTDKNKEKNAKEE 47
>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 174 GSDDSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQS 299
G D+ D+ GK+ + E ++ SS+R ++ ++A+ S
Sbjct: 890 GKDEKDEKEGKEGKEDKDEKDSDGSSQRPSLDLVVQQASDGS 931
>SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11)
Length = 305
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 314 ESNKKSREFENKEAESSTYRDKN 382
+ +KS E E KEAE + R+KN
Sbjct: 130 QEKRKSEEREKKEAEKAQQREKN 152
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 180 DDSDKNRGKDTDDKYSETGTNKSSE 254
D++D N D +D Y G N S++
Sbjct: 197 DNNDNNDNNDNNDNYDNNGNNDSND 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,147,713
Number of Sequences: 59808
Number of extensions: 127005
Number of successful extensions: 934
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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