Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0629.Seq
         (419 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   3.4  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   6.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   7.9  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +2

Query: 227  RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAES 361
            R R+Q     K+G R  S+SG    R    S  +SR      + S
Sbjct: 1133 RSRSQSAGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRSRS 1177


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
           E+E+ E  ++ R+   KE      R+K R   +  E
Sbjct: 489 EKEQREKEERERQQREKEQREREQREKEREREAARE 524



 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/56 (19%), Positives = 23/56 (41%)
 Frame = +2

Query: 248 IRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPHE 415
           +R +   R+  ++ +  E+E+    ++ RE   KE      R+K        E  +
Sbjct: 452 LREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQ 507


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 326 KSREFENKEAESSTYRDKNRSXNSGSE 406
           K  +   +  E STYRDK+ S ++  E
Sbjct: 699 KDADGNGEGTEESTYRDKDESFDTPEE 725


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = +2

Query: 320 NKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
           NKK+ + ++ +A S +  + +   +S ++PH
Sbjct: 325 NKKNSQRQSAQANSGSSNNSSSHSHSQAQPH 355


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 186 SDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKNPN 317
           S  +   ++  KY+  G   ++ ++ ASV  R A  +++ K  N
Sbjct: 75  SSSSGSGNSSKKYAYCGLPYATPQQSASVQRRNARERNRVKQVN 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,008
Number of Sequences: 2352
Number of extensions: 3790
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)