Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0629.Seq
(419 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomer... 32 0.36
M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase ... 32 0.36
BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p pro... 32 0.36
BT021282-1|AAX33430.1| 991|Drosophila melanogaster RE36502p pro... 32 0.36
BT001509-1|AAN71264.1| 746|Drosophila melanogaster LD40727p pro... 32 0.36
BT001493-1|AAN71248.1| 864|Drosophila melanogaster LD30051p pro... 32 0.36
AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC... 32 0.36
AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA... 32 0.36
AE014297-4178|AAN14129.1| 956|Drosophila melanogaster CG12877-P... 32 0.36
AE014297-4177|ABC66193.1| 991|Drosophila melanogaster CG12877-P... 32 0.36
AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-P... 32 0.36
AY119446-1|AAM50100.1| 1057|Drosophila melanogaster AT09405p pro... 30 1.4
AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein. 30 1.4
AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA... 30 1.4
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 1.9
AY061488-1|AAL29036.1| 244|Drosophila melanogaster LD45195p pro... 29 1.9
AY051423-1|AAK92847.1| 213|Drosophila melanogaster GH10002p pro... 29 1.9
AE014297-2618|AAF55628.1| 213|Drosophila melanogaster CG6013-PA... 29 1.9
AE014296-508|AAF47684.1| 244|Drosophila melanogaster CG1240-PA ... 29 1.9
AY051813-1|AAK93237.1| 1095|Drosophila melanogaster LD32234p pro... 29 2.5
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 2.5
AF217845-1|AAF34753.1| 1178|Drosophila melanogaster DESERT protein. 29 2.5
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 29 2.5
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 2.5
AE014296-1518|AAN11996.1| 1235|Drosophila melanogaster CG32025-P... 29 2.5
AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE... 29 2.5
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 29 3.3
AE014297-1864|AAF55071.1| 174|Drosophila melanogaster CG14852-P... 29 3.3
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 28 4.4
AY061188-1|AAL28736.1| 321|Drosophila melanogaster LD15209p pro... 28 4.4
AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p pro... 28 4.4
AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DN... 28 4.4
AE014298-898|AAF46166.1| 321|Drosophila melanogaster CG3918-PA ... 28 4.4
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 28 4.4
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 28 4.4
AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB... 28 4.4
AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA... 28 4.4
BT016057-1|AAV36942.1| 961|Drosophila melanogaster LP14942p pro... 28 5.8
BT011199-1|AAR88561.1| 689|Drosophila melanogaster GH11476p pro... 28 5.8
AY095014-1|AAM11342.1| 860|Drosophila melanogaster GH25405p pro... 28 5.8
AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p pro... 28 5.8
AY051737-1|AAK93161.1| 1009|Drosophila melanogaster LD26426p pro... 28 5.8
AE014297-4269|AAO41607.1| 1009|Drosophila melanogaster CG1646-PC... 28 5.8
AE014297-4268|AAF56816.1| 1009|Drosophila melanogaster CG1646-PA... 28 5.8
AE014297-4267|AAO41608.2| 1026|Drosophila melanogaster CG1646-PD... 28 5.8
AE014297-4266|AAN14302.2| 1066|Drosophila melanogaster CG1646-PB... 28 5.8
AE014297-537|AAF54079.2| 1047|Drosophila melanogaster CG1979-PA ... 28 5.8
AE014296-3038|AAG22572.1| 961|Drosophila melanogaster CG18811-P... 28 5.8
AE013599-1854|AAM70996.1| 860|Drosophila melanogaster CG8485-PD... 28 5.8
AE013599-1853|AAM70995.1| 860|Drosophila melanogaster CG8485-PC... 28 5.8
AE013599-1852|AAM70994.1| 860|Drosophila melanogaster CG8485-PB... 28 5.8
AE013599-1851|AAF58274.1| 860|Drosophila melanogaster CG8485-PA... 28 5.8
AE001572-1|AAD19791.1| 660|Drosophila melanogaster unknown prot... 28 5.8
AY061610-1|AAL29158.1| 628|Drosophila melanogaster SD07532p pro... 27 7.7
AJ580980-1|CAE45726.1| 630|Drosophila melanogaster PNUTSDm prot... 27 7.7
AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm prot... 27 7.7
AE014298-643|AAF45958.1| 630|Drosophila melanogaster CG3546-PA ... 27 7.7
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 27 7.7
AE014134-178|AAN10490.1| 593|Drosophila melanogaster CG33526-PC... 27 7.7
AE014134-177|AAF51438.2| 628|Drosophila melanogaster CG33526-PB... 27 7.7
AE014134-176|AAF51439.2| 628|Drosophila melanogaster CG33526-PA... 27 7.7
AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD... 27 7.7
>U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomerase
I protein.
Length = 972
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 183 DSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKN 311
D DK+RG + ++ + +++ ER +S + ++S SK K+
Sbjct: 145 DKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKH 187
>M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase I
protein.
Length = 972
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 183 DSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKN 311
D DK+RG + ++ + +++ ER +S + ++S SK K+
Sbjct: 145 DKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKH 187
>BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p
protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 183 DSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKN 311
D DK+RG + ++ + +++ ER +S + ++S SK K+
Sbjct: 147 DKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKH 189
>BT021282-1|AAX33430.1| 991|Drosophila melanogaster RE36502p
protein.
Length = 991
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
RDR++ + K+ +RD K ++ KS + K R E + SS+ + K+ S +S S+
Sbjct: 207 RDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSK 266
>BT001509-1|AAN71264.1| 746|Drosophila melanogaster LD40727p
protein.
Length = 746
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
RDR++ + K+ +RD K ++ KS + K R E + SS+ + K+ S +S S+
Sbjct: 16 RDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSK 75
>BT001493-1|AAN71248.1| 864|Drosophila melanogaster LD30051p
protein.
Length = 864
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
RDR++ + K+ +RD K ++ KS + K R E + SS+ + K+ S +S S+
Sbjct: 80 RDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSK 139
>AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC,
isoform C protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 183 DSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKN 311
D DK+RG + ++ + +++ ER +S + ++S SK K+
Sbjct: 147 DKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKH 189
>AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA,
isoform A protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 183 DSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKN 311
D DK+RG + ++ + +++ ER +S + ++S SK K+
Sbjct: 147 DKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKH 189
>AE014297-4178|AAN14129.1| 956|Drosophila melanogaster CG12877-PB,
isoform B protein.
Length = 956
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
RDR++ + K+ +RD K ++ KS + K R E + SS+ + K+ S +S S+
Sbjct: 207 RDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSK 266
>AE014297-4177|ABC66193.1| 991|Drosophila melanogaster CG12877-PC,
isoform C protein.
Length = 991
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
RDR++ + K+ +RD K ++ KS + K R E + SS+ + K+ S +S S+
Sbjct: 207 RDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSK 266
>AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-PA,
isoform A protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSE 406
RDR++ + K+ +RD K ++ KS + K R E + SS+ + K+ S +S S+
Sbjct: 207 RDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSK 266
>AY119446-1|AAM50100.1| 1057|Drosophila melanogaster AT09405p
protein.
Length = 1057
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 290 VTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+ ER +E + E EAE R NRS +G+ PH
Sbjct: 557 IEFERMGAELGRLHDRLEKAEAEREALRQANRSGGAGAAPH 597
>AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.
Length = 1740
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 290 VTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+ ER +E + E EAE R NRS +G+ PH
Sbjct: 1240 IEFERMGAELGRLHDRLEKAEAEREALRQANRSGGAGAAPH 1280
>AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA
protein.
Length = 1740
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 290 VTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+ ER +E + E EAE R NRS +G+ PH
Sbjct: 1240 IEFERMGAELGRLHDRLEKAEAEREALRQANRSGGAGAAPH 1280
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
RDR++ R K KR S+ R+K+ S R K+ ES R+++R
Sbjct: 113 RDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDHRHHRTKDGESHRERERDR 165
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+RE+ ++ R+ + K ++S RDK R N H
Sbjct: 110 DRERDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDH 147
>AY061488-1|AAL29036.1| 244|Drosophila melanogaster LD45195p
protein.
Length = 244
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 180 DDSDKNRGKDTD-DKYSETGTNKSSERRQASVMARRAASQSKGKNPNPTR 326
+D D + GKD D D E+ ++ + + A + QS K P PT+
Sbjct: 64 EDEDDDEGKDPDADPDDESEPSEEEDPSSSEEEAAKKKKQSPKKRPQPTK 113
>AY051423-1|AAK92847.1| 213|Drosophila melanogaster GH10002p
protein.
Length = 213
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 266 KRDGSKSGVTVEREKSESNKKS-REFENKEAESSTYRDKNRS 388
K+ G S RE+ E+ KK+ +E ++KEAE +RD +++
Sbjct: 3 KKMGINSKAVEARERKEATKKATQEKKSKEAEDRLWRDDDKN 44
>AE014297-2618|AAF55628.1| 213|Drosophila melanogaster CG6013-PA
protein.
Length = 213
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 266 KRDGSKSGVTVEREKSESNKKS-REFENKEAESSTYRDKNRS 388
K+ G S RE+ E+ KK+ +E ++KEAE +RD +++
Sbjct: 3 KKMGINSKAVEARERKEATKKATQEKKSKEAEDRLWRDDDKN 44
>AE014296-508|AAF47684.1| 244|Drosophila melanogaster CG1240-PA
protein.
Length = 244
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 180 DDSDKNRGKDTD-DKYSETGTNKSSERRQASVMARRAASQSKGKNPNPTR 326
+D D + GKD D D E+ ++ + + A + QS K P PT+
Sbjct: 64 EDEDDDEGKDPDADPDDESEPSEEEDPSSSEEEAAKKKKQSPKKRPQPTK 113
>AY051813-1|AAK93237.1| 1095|Drosophila melanogaster LD32234p
protein.
Length = 1095
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 171 TGSDDSDKNRGKDTDDKYSETGTNKSSE-RRQASVMARRAASQSKGKNPNPTR 326
TG+ S +RGK K + GT+ + + RRQ + + A + + + P PTR
Sbjct: 676 TGAGVSSSSRGKSNSTKSTGKGTDAAPQVRRQTRLHSLGAVNMASARTP-PTR 727
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+RE+ ++ R+ + K ++S RDK R N H
Sbjct: 110 DRERDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDH 147
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
RDR++ R K KR S+ R+K+ S R K+ +S R+++R
Sbjct: 113 RDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDHRHHRTKDGDSHRERERDR 165
>AF217845-1|AAF34753.1| 1178|Drosophila melanogaster DESERT protein.
Length = 1178
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEP 409
EREK + +K +E E K +E+S DK+ + +P
Sbjct: 203 EREKEKEKEKEQEIEEKPSETSNGIDKSPAKQQVEKP 239
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+RE+ ++ R+ + K ++S RDK R N H
Sbjct: 23 DRERDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDH 60
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
RDR++ R K KR S+ R+K+ S R K+ +S R+++R
Sbjct: 26 RDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDHRHHRTKDGDSHRERERDR 78
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
+RE+ ++ R+ + K ++S RDK R N H
Sbjct: 110 DRERDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDH 147
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 227 RDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
RDR++ R K KR S+ R+K+ S R K+ +S R+++R
Sbjct: 113 RDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDHRHHRTKDGDSHRERERDR 165
>AE014296-1518|AAN11996.1| 1235|Drosophila melanogaster CG32025-PA
protein.
Length = 1235
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 299 EREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEP 409
EREK + +K +E E K +E+S DK+ + +P
Sbjct: 203 EREKEKEKEKEQEIEEKPSETSNGIDKSPAKQQVEKP 239
>AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE,
isoform E protein.
Length = 2497
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 171 TGSDDSDKNRGKDTDDKYSETGTNKSSE-RRQASVMARRAASQSKGKNPNPTR 326
TG+ S +RGK K + GT+ + + RRQ + + A + + + P PTR
Sbjct: 2078 TGAGVSSSSRGKSNSTKSTGKGTDAAPQVRRQTRLHSLGAVNMASARTP-PTR 2129
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 215 R*IFRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS 388
R I R R++ R+K +R SK + +EK +SN+K R E + ++S +D+ RS
Sbjct: 452 RSIERQRSKERQRSKERQRSRSKDALRC-KEKPQSNEKERSRERRRSKS---KDRQRS 505
>AE014297-1864|AAF55071.1| 174|Drosophila melanogaster CG14852-PA
protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 171 TGSDDSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKNPN 317
TGS DS + G + + N RRQ + ARR +Q + N
Sbjct: 111 TGSPDSTPDSGSGSSNNSGNNKRNNRRRRRQRAQRARRRRAQQARRRRN 159
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
T T + S S + ++EK + + R ++K ST RD++RS + H
Sbjct: 318 TSTSSQSKSHSK-SRDKEKEKDRRHHRHSDDKHRRRSTDRDRDRSRDKSHSKH 369
>AY061188-1|AAL28736.1| 321|Drosophila melanogaster LD15209p
protein.
Length = 321
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 245 IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+ +TKTGKR S S + + S+ S + + + SS+ S +S S
Sbjct: 180 LAKTKTGKRPSSGSTNKKSKRRRSSSTSSSDSSSSSSSSSSSSSSTSSSSSSS 232
>AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p
protein.
Length = 1311
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 302 REKSESNKKSREFENKEAESSTYRDKNRSXNSG 400
R+KSES+K S +FE +E + R + + +SG
Sbjct: 333 RKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSG 365
>AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DNA
helicase protein.
Length = 1311
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 302 REKSESNKKSREFENKEAESSTYRDKNRSXNSG 400
R+KSES+K S +FE +E + R + + +SG
Sbjct: 333 RKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSG 365
>AE014298-898|AAF46166.1| 321|Drosophila melanogaster CG3918-PA
protein.
Length = 321
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 245 IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+ +TKTGKR S S + + S+ S + + + SS+ S +S S
Sbjct: 180 LAKTKTGKRPSSGSTNKKSKRRRSSSTSSSDSSSSSSSSSSSSSSTSSSSSSS 232
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
T T + S S + ++EK + + R ++K ST RD++RS + H
Sbjct: 581 TSTSSQSKSHSK-SRDKEKEKDRRHHRHSDDKHRRRSTDRDRDRSRDKSHSKH 632
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPH 412
T T + S S + ++EK + + R ++K ST RD++RS + H
Sbjct: 581 TSTSSQSKSHSK-SRDKEKEKDRRHHRHSDDKHRRRSTDRDRDRSRDKSHSKH 632
>AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB,
isoform B protein.
Length = 1311
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 302 REKSESNKKSREFENKEAESSTYRDKNRSXNSG 400
R+KSES+K S +FE +E + R + + +SG
Sbjct: 333 RKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSG 365
>AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA,
isoform A protein.
Length = 1311
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 302 REKSESNKKSREFENKEAESSTYRDKNRSXNSG 400
R+KSES+K S +FE +E + R + + +SG
Sbjct: 333 RKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSG 365
>BT016057-1|AAV36942.1| 961|Drosophila melanogaster LP14942p protein.
Length = 961
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 200 RKGY*R*IFRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDK 379
R G R +R R G+ G+ SGV +S + + ++N TY +
Sbjct: 831 RNGGDRGNYRSRQYGNSSNTNGRNSGNSSGVYFRNNESGNGGGNNYYQNGGGGGGTYNKE 890
Query: 380 NRSXNSG 400
+R +SG
Sbjct: 891 SRYESSG 897
>BT011199-1|AAR88561.1| 689|Drosophila melanogaster GH11476p
protein.
Length = 689
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 251 RTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTY 370
+T+TG ++ S ++E SN ++R+ + + ESS++
Sbjct: 306 KTQTGTKNSQTSTQSIEDLNQGSNPETRDIQTPKGESSSF 345
>AY095014-1|AAM11342.1| 860|Drosophila melanogaster GH25405p
protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKN 382
+K+G G K G + +E KS+ N+KS +N++ + + DK+
Sbjct: 612 SKSGSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKH 657
>AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p
protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKN 382
+K+G G K G + +E KS+ N+KS +N++ + + DK+
Sbjct: 612 SKSGSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKH 657
>AY051737-1|AAK93161.1| 1009|Drosophila melanogaster LD26426p
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 236 NQ*IIRTKTG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
N+ +IR + +R SKS + + + +S+ S++ ++KE E +DK++
Sbjct: 485 NEEVIRLRKDFHERQQSKSSKSSSKHRRDSSSSSKDKDSKEREREKDKDKDK 536
>AE014297-4269|AAO41607.1| 1009|Drosophila melanogaster CG1646-PC,
isoform C protein.
Length = 1009
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 236 NQ*IIRTKTG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
N+ +IR + +R SKS + + + +S+ S++ ++KE E +DK++
Sbjct: 485 NEEVIRLRKDFHERQQSKSSKSSSKHRRDSSSSSKDKDSKEREREKDKDKDK 536
>AE014297-4268|AAF56816.1| 1009|Drosophila melanogaster CG1646-PA,
isoform A protein.
Length = 1009
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 236 NQ*IIRTKTG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
N+ +IR + +R SKS + + + +S+ S++ ++KE E +DK++
Sbjct: 485 NEEVIRLRKDFHERQQSKSSKSSSKHRRDSSSSSKDKDSKEREREKDKDKDK 536
>AE014297-4267|AAO41608.2| 1026|Drosophila melanogaster CG1646-PD,
isoform D protein.
Length = 1026
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 236 NQ*IIRTKTG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
N+ +IR + +R SKS + + + +S+ S++ ++KE E +DK++
Sbjct: 502 NEEVIRLRKDFHERQQSKSSKSSSKHRRDSSSSSKDKDSKEREREKDKDKDK 553
>AE014297-4266|AAN14302.2| 1066|Drosophila melanogaster CG1646-PB,
isoform B protein.
Length = 1066
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 236 NQ*IIRTKTG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 385
N+ +IR + +R SKS + + + +S+ S++ ++KE E +DK++
Sbjct: 542 NEEVIRLRKDFHERQQSKSSKSSSKHRRDSSSSSKDKDSKEREREKDKDKDK 593
>AE014297-537|AAF54079.2| 1047|Drosophila melanogaster CG1979-PA
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 251 RTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTY 370
+T+TG ++ S ++E SN ++R+ + + ESS++
Sbjct: 306 KTQTGTKNSQTSTQSIEDLNQGSNPETRDIQTPKGESSSF 345
>AE014296-3038|AAG22572.1| 961|Drosophila melanogaster CG18811-PA
protein.
Length = 961
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 200 RKGY*R*IFRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDK 379
R G R +R R G+ G+ SGV +S + + ++N TY +
Sbjct: 831 RNGGDRGNYRSRQYGNSSNTNGRNSGNSSGVYFRNNESGNGGGNNYYQNGGGGGGTYNKE 890
Query: 380 NRSXNSG 400
+R +SG
Sbjct: 891 SRYESSG 897
>AE013599-1854|AAM70996.1| 860|Drosophila melanogaster CG8485-PD,
isoform D protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKN 382
+K+G G K G + +E KS+ N+KS +N++ + + DK+
Sbjct: 612 SKSGSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKH 657
>AE013599-1853|AAM70995.1| 860|Drosophila melanogaster CG8485-PC,
isoform C protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKN 382
+K+G G K G + +E KS+ N+KS +N++ + + DK+
Sbjct: 612 SKSGSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKH 657
>AE013599-1852|AAM70994.1| 860|Drosophila melanogaster CG8485-PB,
isoform B protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKN 382
+K+G G K G + +E KS+ N+KS +N++ + + DK+
Sbjct: 612 SKSGSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKH 657
>AE013599-1851|AAF58274.1| 860|Drosophila melanogaster CG8485-PA,
isoform A protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 TKTGKRDGSKSGVTVERE---KSESNKKSREFENKEAESSTYRDKN 382
+K+G G K G + +E KS+ N+KS +N++ + + DK+
Sbjct: 612 SKSGSVSGKKEGQSQYKEPNNKSDENRKSHSQKNRKQHNKDHVDKH 657
>AE001572-1|AAD19791.1| 660|Drosophila melanogaster unknown
protein.
Length = 660
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 251 RTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTY 370
+T+TG ++ S ++E SN ++R+ + + ESS++
Sbjct: 260 KTQTGTKNSQTSTQSIEDLNQGSNPETRDIQTPKGESSSF 299
>AY061610-1|AAL29158.1| 628|Drosophila melanogaster SD07532p
protein.
Length = 628
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 348 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 400
>AJ580980-1|CAE45726.1| 630|Drosophila melanogaster PNUTSDm protein
protein.
Length = 630
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 348 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 400
>AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm protein
protein.
Length = 1135
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 348 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 400
>AE014298-643|AAF45958.1| 630|Drosophila melanogaster CG3546-PA
protein.
Length = 630
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 171 TGSDDSDKNRGKDTDDKYSETGTNKSSERRQASVMARRAASQSKGKN 311
+GS+ SDK + K K S + ++ S+RR + ++S S +
Sbjct: 429 SGSNSSDKKKNKKKKKKPSSSSSSSLSQRRTKKKKKQSSSSSSSSSS 475
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 278 SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGSEPHE 415
S S + E S S+ +S + ESS+ N+ NSGS ++
Sbjct: 264 SNSSSSQESSTSSSSNQSSSTSSNHQESSSESSNNQESNSGSSSNQ 309
>AE014134-178|AAN10490.1| 593|Drosophila melanogaster CG33526-PC,
isoform C protein.
Length = 593
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 313 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 365
>AE014134-177|AAF51438.2| 628|Drosophila melanogaster CG33526-PB,
isoform B protein.
Length = 628
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 348 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 400
>AE014134-176|AAF51439.2| 628|Drosophila melanogaster CG33526-PA,
isoform A protein.
Length = 628
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 348 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 400
>AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD,
isoform D protein.
Length = 1135
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 224 FRDRNQ*IIRTKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSXNSGS 403
+RD+++ R+ +G SK +RE+S + S ++K ++SS+ + S +SGS
Sbjct: 348 YRDKDK--ARSSSGSSSSSK-----DRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS 400
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,761,517
Number of Sequences: 53049
Number of extensions: 181253
Number of successful extensions: 1141
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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