Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0628.Seq
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 95 2e-20
03_01_0547 + 4093196-4093657,4094267-4095148 95 2e-20
03_01_0544 + 4082528-4082989,4083585-4084466 95 2e-20
03_01_0543 + 4076981-4077442,4078145-4079026 95 2e-20
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 44 1e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 42 2e-04
02_04_0462 + 23131433-23132836 42 2e-04
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 37 0.012
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 37 0.012
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 36 0.021
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 36 0.028
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 2.4
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 2.4
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 3.2
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 28 5.6
11_01_0694 - 5719188-5720400,5720439-5721194,5722004-5722247,572... 27 7.5
07_03_1080 + 23815232-23817040 27 7.5
03_02_0131 - 5796564-5796605,5797188-5797421,5798415-5798717,579... 27 7.5
01_06_1602 - 38559661-38559936,38560008-38560137,38562550-385627... 27 7.5
07_03_1637 + 28293033-28293779,28294652-28295233,28295650-282958... 27 9.9
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 27 9.9
04_04_0359 + 24679907-24680146,24680511-24680939,24681111-246824... 27 9.9
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 27 9.9
01_05_0452 + 22371685-22372599,22372686-22372829,22373046-22373417 27 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 95.5 bits (227), Expect = 2e-20
Identities = 49/94 (52%), Positives = 61/94 (64%)
Frame = +2
Query: 254 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPATSLLKSNLWRCTTKLS 433
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ + +
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 434 KKLYLETIVGFNVKNVSRQGIASWXXAGDFKNKP 535
++ VGFNVKNV+ + + A + K+ P
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 176
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 95.5 bits (227), Expect = 2e-20
Identities = 49/94 (52%), Positives = 61/94 (64%)
Frame = +2
Query: 254 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPATSLLKSNLWRCTTKLS 433
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ + +
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 434 KKLYLETIVGFNVKNVSRQGIASWXXAGDFKNKP 535
++ VGFNVKNV+ + + A + K+ P
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 176
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 95.5 bits (227), Expect = 2e-20
Identities = 49/94 (52%), Positives = 61/94 (64%)
Frame = +2
Query: 254 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPATSLLKSNLWRCTTKLS 433
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ + +
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 434 KKLYLETIVGFNVKNVSRQGIASWXXAGDFKNKP 535
++ VGFNVKNV+ + + A + K+ P
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 176
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 95.5 bits (227), Expect = 2e-20
Identities = 49/94 (52%), Positives = 61/94 (64%)
Frame = +2
Query: 254 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPATSLLKSNLWRCTTKLS 433
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ + +
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 434 KKLYLETIVGFNVKNVSRQGIASWXXAGDFKNKP 535
++ VGFNVKNV+ + + A + K+ P
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
Score = 88.2 bits (209), Expect = 4e-18
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 176
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS--TKM-PWFK 173
DS E YS+ RF IK ++ ++++ GY +AVA+VPIS +N++ + T++ W+
Sbjct: 385 DSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTRLSSWYD 442
Query: 174 G 176
G
Sbjct: 443 G 443
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 242 PATCRPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAP 382
P R KPLRLP+ DV+ +G V + G+VE G + G+ ++ P
Sbjct: 454 PPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMP 501
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 242 PATCRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 361
P R DK +P++DV+ I G GTV GRVE G +K G
Sbjct: 258 PDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTG 297
>02_04_0462 + 23131433-23132836
Length = 467
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 242 PATCRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 370
P R TD P L ++DV+ I G GTV GR+E G +K G V
Sbjct: 269 PVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTV 311
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 21 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKMPWFKGW 179
YS+ RFE IK ++ S+++ + ++V ++P+S N+++ PS W++G+
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGF 460
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 254 RPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAP 382
R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 474 RDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 21 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKMPWFKGW 179
YS+ RFE IK ++ S+++ + ++V ++P+S N+++ PS W++G+
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGF 460
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 254 RPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAP 382
R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 474 RDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 35.9 bits (79), Expect = 0.021
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFK 173
D + +S+ R++EI+ ++ ++K GYN V F+PISG G NM K W+
Sbjct: 102 DESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNCSWWS 161
Query: 174 G 176
G
Sbjct: 162 G 162
Score = 34.3 bits (75), Expect = 0.065
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 236 CHPATCRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPATSLLK 400
C R P+R+P+ D YK +GTV +G++E+G + G ++ P + +K
Sbjct: 171 CIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVK 223
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 35.5 bits (78), Expect = 0.028
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 236 CHPATCRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPATSLLK 400
C R P+R+P+ D YK +GTV +G++E+G ++ G ++ P + +K
Sbjct: 216 CIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVK 268
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 140
D +S+ R++EI+ ++ +++ GYN V F+PISG G NM
Sbjct: 147 DEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNM 193
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 77 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 178
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 77 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 178
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 89
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +3
Query: 6 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 158
STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 324 STEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>11_01_0694 -
5719188-5720400,5720439-5721194,5722004-5722247,
5723862-5723901
Length = 750
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 285 CKTYTKSVVLVPCPSAEL-KLVC*NQ-VPLLSLPPQHHY*SQICGDAPRSSP 434
C T S V C S L KLV +Q V L LPP H CGD +SP
Sbjct: 464 CHTSASSSSAVACLSDHLCKLVPMHQWVLLCHLPPLLHLHIDGCGDLSSASP 515
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 345 PVSTLPTGTVPIPPILYTS-CRGRRRGL 265
P S+ PTGT P PP+ +S G GL
Sbjct: 123 PASSTPTGTAPTPPLSTSSTAAGAGHGL 150
>03_02_0131 -
5796564-5796605,5797188-5797421,5798415-5798717,
5799260-5799847,5800594-5800749,5800861-5800919,
5801935-5802262
Length = 569
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 98 SSWVVANLLDV*GYFLLDFLKSGLTVWWF 12
++W N+ + ++L + LKSGLT+W F
Sbjct: 461 AAWRKTNIRETYHFWLKENLKSGLTLWKF 489
>01_06_1602 -
38559661-38559936,38560008-38560137,38562550-38562778,
38563627-38563659,38563746-38563896
Length = 272
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 59 ILIHQEDWLQPSCCRFRAHFWM---ARRQHVGAFNQNALVQGMAGGA*RRQS*RKMPH*S 229
+ +H + WL F A F ARR+ N + + GA ++Q+ K P+ S
Sbjct: 112 VAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQAKEKTPNSS 171
Query: 230 SRCHPATCRPTDK 268
S+ + + + K
Sbjct: 172 SKSNKPSSKVQSK 184
>07_03_1637 +
28293033-28293779,28294652-28295233,28295650-28295863,
28295894-28295911,28295983-28296118,28296203-28296281
Length = 591
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 296 IRLAGEDAGACQWGGRWQDGI-ESFNEAFS 210
+ + ED G C GG W+ I E FNEAF+
Sbjct: 57 VEVCPEDDGGC-GGGGWKVAIAEMFNEAFA 85
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 3 DSTEPPYSEPRFEEIKKEVSSYI 71
D T PPY PR EEI ++ + ++
Sbjct: 49 DYTPPPYDGPRAEEISRKRAEFL 71
>04_04_0359 +
24679907-24680146,24680511-24680939,24681111-24682402,
24682486-24682737,24682818-24682928,24683016-24683076,
24683178-24683270,24683348-24683533
Length = 887
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 30 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 182
P+ E+ KE KK P WHG + S+KM W +G++
Sbjct: 192 PKVEQWTKEEEEMRKKRQLVPMEEWTQRSRNWHGGRVRGVSSKMSWKEGFK 242
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 18 PYSEPRFEEIKKEVSSYIKKIGYNPAAVA 104
PY +P FE++ KE SY K +PA A
Sbjct: 55 PYCKPHFEQLFKETGSYNKSF-QSPAKPA 82
>01_05_0452 + 22371685-22372599,22372686-22372829,22373046-22373417
Length = 476
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 258 GRQVAGWHRELQ*GIFRQLCLLYAP 184
G Q+ GW R L RQLCL+ AP
Sbjct: 123 GYQLGGWLRALAAKGVRQLCLMGAP 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,857,000
Number of Sequences: 37544
Number of extensions: 408773
Number of successful extensions: 1357
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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