Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0627.Seq
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 111 2e-25
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 111 2e-25
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 111 2e-25
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 111 2e-25
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 111 2e-25
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 111 2e-25
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 111 2e-25
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 106 6e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 94 4e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 63 1e-10
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 46 1e-05
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.031
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.031
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.073
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 4.8
U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain in... 27 8.3
U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain in... 27 8.3
U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain int... 27 8.3
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 90
Score = 101 bits (243), Expect = 2e-22
Identities = 54/105 (51%), Positives = 62/105 (59%)
Frame = +1
Query: 133 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAK 312
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 313 XXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELR+ PEEHPV LT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLT 106
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 108 bits (260), Expect = 2e-24
Identities = 58/107 (54%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 107 bits (257), Expect = 4e-24
Identities = 57/107 (53%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 108 bits (260), Expect = 2e-24
Identities = 58/107 (54%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 108 bits (260), Expect = 2e-24
Identities = 58/107 (54%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 108 bits (260), Expect = 2e-24
Identities = 58/107 (54%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 105 bits (253), Expect = 1e-23
Identities = 55/107 (51%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 108 bits (260), Expect = 2e-24
Identities = 58/107 (54%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 23 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 77
Score = 70.1 bits (164), Expect = 7e-13
Identities = 40/89 (44%), Positives = 46/89 (51%)
Frame = +1
Query: 181 KAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKXXXXXXXXXXXXXXXL 360
+AGFAGDDAPRAVFPSIVGRPRHQG ++ ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 361 TGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHPV LT
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLT 93
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 91
Score = 108 bits (260), Expect = 2e-24
Identities = 58/107 (54%), Positives = 64/107 (59%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHR 306
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 307 AKXXXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+K + FYNELRV PEEHPV LT
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 106 bits (255), Expect = 6e-24
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +3
Query: 258 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTF
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 47
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 397 FYNELRVTPEEHPVXLT 447
FYNELRV PEEHPV LT
Sbjct: 47 FYNELRVAPEEHPVLLT 63
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 7e-21
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKI 383
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 94.3 bits (224), Expect = 4e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 7e-21
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKI 383
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 7e-21
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKI 383
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.3 bits (224), Expect = 4e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 93.5 bits (222), Expect = 6e-20
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 374
G+ GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 255 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFLQ 404
VM G D ++G +A+S RG+ +++YP+EHGIV NW DM KIW + F Q
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQ 95
Score = 46.8 bits (106), Expect = 7e-06
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 249
+V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 55.2 bits (127), Expect = 2e-08
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 276 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
KD VG+E R +L + YP+++GIV NWDDM +W HTF
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTF 93
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 243
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMXKIWHHTFLQ*AACHP 422
V G+ D ++GDEA S T+KYPI HGIV +WD M + W + P
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEP 112
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 234
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.031
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 243 PPSGVMVGMGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMXKIWHHTF 398
P S V +K +V E + +L Y PIE G V NWD +IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.031
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 243 PPSGVMVGMGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMXKIWHHTF 398
P S V +K +V E + +L Y PIE G V NWD +IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.5 bits (73), Expect = 0.073
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 234
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 181 KAGFAGDDAPRAVFPSIVGRPRHQG 255
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 206 ASSPAKPALHIPEPLSTTNAATSS 135
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 206 ASSPAKPALHIPEPLSTTNAATSS 135
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 206 ASSPAKPALHIPEPLSTTNAATSS 135
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 206 ASSPAKPALHIPEPLSTTNAATSS 135
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 365 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 255
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform c protein.
Length = 740
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 324 SGYLFCSVPHLLHKSPSVPYRPSPLMAGP 238
+GY F + H HK + +P P MA P
Sbjct: 383 NGYNFANYVHEAHKRMEICRKPGPAMATP 411
>U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform a protein.
Length = 821
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 324 SGYLFCSVPHLLHKSPSVPYRPSPLMAGP 238
+GY F + H HK + +P P MA P
Sbjct: 464 NGYNFANYVHEAHKRMEICRKPGPAMATP 492
>U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform b protein.
Length = 846
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 324 SGYLFCSVPHLLHKSPSVPYRPSPLMAGP 238
+GY F + H HK + +P P MA P
Sbjct: 489 NGYNFANYVHEAHKRMEICRKPGPAMATP 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,284,223
Number of Sequences: 27780
Number of extensions: 248275
Number of successful extensions: 789
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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