Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0627.Seq
(449 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 109 8e-25
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 109 8e-25
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 109 1e-24
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 109 1e-24
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 109 1e-24
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 109 1e-24
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 105 1e-23
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 105 1e-23
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 105 1e-23
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 100 9e-22
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 82 2e-16
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 73 9e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 5e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 6e-09
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 49 1e-06
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 45 3e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.12
At5g56630.1 68418.m07070 phosphofructokinase family protein simi... 32 0.16
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.48
At4g26270.1 68417.m03780 phosphofructokinase family protein simi... 30 0.83
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 3.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 4.4
At4g36790.1 68417.m05219 transporter-related low similarity to s... 27 4.4
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 27 4.4
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 7.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 27 7.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 27 7.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 109 bits (262), Expect = 8e-25
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDM KIWHHTF
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTF 92
Score = 86.6 bits (205), Expect = 7e-18
Identities = 48/104 (46%), Positives = 56/104 (53%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G ++ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHPV LT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 109 bits (262), Expect = 8e-25
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDM KIWHHTF
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTF 92
Score = 86.6 bits (205), Expect = 7e-18
Identities = 48/104 (46%), Positives = 56/104 (53%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G ++ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHPV LT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 109 bits (261), Expect = 1e-24
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDM KIWHHTF
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF 92
Score = 86.2 bits (204), Expect = 9e-18
Identities = 48/104 (46%), Positives = 56/104 (53%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G ++ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHPV LT
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 109 bits (261), Expect = 1e-24
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDM KIWHHTF
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF 92
Score = 85.8 bits (203), Expect = 1e-17
Identities = 47/104 (45%), Positives = 56/104 (53%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G ++ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHP+ LT
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 109 bits (261), Expect = 1e-24
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDM KIWHHTF
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF 92
Score = 86.2 bits (204), Expect = 9e-18
Identities = 48/104 (46%), Positives = 56/104 (53%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G ++ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHPV LT
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 109 bits (261), Expect = 1e-24
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDM KIWHHTF
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF 92
Score = 85.8 bits (203), Expect = 1e-17
Identities = 47/104 (45%), Positives = 56/104 (53%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G ++ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHP+ LT
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 105 bits (253), Expect = 1e-23
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDM KIWHHTF
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTF 92
Score = 85.0 bits (201), Expect = 2e-17
Identities = 44/104 (42%), Positives = 57/104 (54%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G +++ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELR+ PEEHPV LT
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 105 bits (253), Expect = 1e-23
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDM KIWHHTF
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTF 92
Score = 85.0 bits (201), Expect = 2e-17
Identities = 44/104 (42%), Positives = 57/104 (54%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G +++ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELR+ PEEHPV LT
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 105 bits (253), Expect = 1e-23
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDM KIWHHTF
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTF 92
Score = 85.0 bits (201), Expect = 2e-17
Identities = 44/104 (42%), Positives = 57/104 (54%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G +++ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELR+ PEEHPV LT
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 99.5 bits (237), Expect = 9e-22
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFLQ*AA 413
G+ GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDM KIWHHTF
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR 98
Query: 414 CHPRGTP 434
P P
Sbjct: 99 LEPEEHP 105
Score = 87.4 bits (207), Expect = 4e-18
Identities = 46/104 (44%), Positives = 57/104 (54%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKX 315
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+G D + +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 316 XXXXXXXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELR+ PEEHP+ LT
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLT 109
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 81.8 bits (193), Expect = 2e-16
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +3
Query: 258 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDM KIW+HTF
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTF 47
Score = 34.7 bits (76), Expect = 0.029
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 397 FYNELRVTPEEHPVXLT 447
FY+ELRV PEEHPV LT
Sbjct: 47 FYSELRVAPEEHPVLLT 63
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 72.9 bits (171), Expect = 9e-14
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +3
Query: 264 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFLQ*AACHPRGTP 434
G+ +SYVG+E + R ILTLK P+EHGIV NWDDM KIWH+TF P P
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 62.9 bits (146), Expect = 1e-10
Identities = 39/99 (39%), Positives = 48/99 (48%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLM*EMRHRAKXXXXXX 330
+V D G GM +AGFAGD+AP+ VFP +VGRPR + + + E H A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD----GLNPNESYVGEEGH-ANRDILTL 58
Query: 331 XXXXXXXXXLTGMTWXRFGIIPFYNELRVTPEEHPVXLT 447
+ FYNELRV PEEHPV LT
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLT 97
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 237
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 270 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
G++ Y G +A + +R + + P + GIVT+WD + +W H F
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAF 108
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 6e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 237
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 285 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
YVG +A S +R + + PI+ GIV++WD + IW H F
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAF 114
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 276 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF 398
KD VG+ R L + YP+ +GIV NWDDM +W H F
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAF 91
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 243
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 279 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMXKIWHHTFLQ*AACHP 422
D Y+GDEA +K R T L YPIEHG V +WD M + W C P
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDP 117
Score = 35.9 bits (79), Expect = 0.013
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 148 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 234
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 252
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 243
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g56630.1 68418.m07070 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 485
Score = 32.3 bits (70), Expect = 0.16
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 321 GYLFCSVPHLLHKSPSVPYRPSPLMAGPSH 232
GY+ VPHL+ P +P P+PL P++
Sbjct: 17 GYILQDVPHLIDYLPDLPTYPNPLQDNPAY 46
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.48
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 386 PNLXHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVLLSHTDHHP*WRGLPTIEGNTA 213
P L V+ ++ D + + + + YI + T RGL +G T+
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKPTRGLIVYQGATS 308
Query: 212 RGASSPAKPALHIPEPLSTTNAATSS 135
+SSPA+P + +P +ST + TS+
Sbjct: 309 --SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g26270.1 68417.m03780 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 489
Score = 29.9 bits (64), Expect = 0.83
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 321 GYLFCSVPHLLHKSPSVPYRPSPLMAGPSH 232
GY+ VPHL P +P P+PL P++
Sbjct: 17 GYVLEDVPHLSDYLPGLPTYPNPLQDNPAY 46
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 374 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 267
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 248 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g36790.1 68417.m05219 transporter-related low similarity to
spinster membrane proteins from [Drosophila
melanogaster] GI:12003976, GI:12003972, GI:12003974,
GI:12003970; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 489
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 344 FDGVFEGQDTSFALCLISYIRVLLSHTDHHP*WRGLPTIEGNTARGASSPAKPAL 180
FD FEG +SFA L+ + L D RG+ ++G++ R A + +K L
Sbjct: 400 FDRAFEGSFSSFAAPLVGILSEKLFGYDS----RGIDPLKGSSVREADALSKGLL 450
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 148 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 240
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVW 270
E++ A + + G G+C A +D + V I GR +G S W
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVVSEW 676
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 294 DEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFLQ 404
D A L++KY + H I + W + +IW L+
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILR 205
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 294 DEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFLQ 404
D A L++KY + H I + W + +IW L+
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILR 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,719,504
Number of Sequences: 28952
Number of extensions: 236859
Number of successful extensions: 654
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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