Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0626.Seq
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X68561-1|CAA48563.1|  784|Homo sapiens SPR-1 protein.                  29   7.3  
X13979-1|CAA32160.2|  182|Homo sapiens protein ( Homo sapiens DN...    29   7.3  
BC109300-1|AAI09301.1|  784|Homo sapiens Sp4 transcription facto...    29   7.3  

>X68561-1|CAA48563.1|  784|Homo sapiens SPR-1 protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 418 IPPQARPGQAQPLQAVLLPRT-VQVHRTLP 332
           +P Q RPG + PLQ   LP T  QV  TLP
Sbjct: 229 VPVQIRPGVSIPLQLQTLPGTQAQVVTTLP 258


>X13979-1|CAA32160.2|  182|Homo sapiens protein ( Homo sapiens DNA
           fragment TVRI-6 repetitive region. ).
          Length = 182

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 436 QCQQHXIPPQARPGQAQPLQAVLLPRTVQVHRTLPP 329
           Q  +H  PP + PG A P  +   PR +    T+PP
Sbjct: 86  QESRHPAPPPSDPGLATPATSPPSPRRLSTKPTVPP 121


>BC109300-1|AAI09301.1|  784|Homo sapiens Sp4 transcription factor
           protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 418 IPPQARPGQAQPLQAVLLPRT-VQVHRTLP 332
           +P Q RPG + PLQ   LP T  QV  TLP
Sbjct: 229 VPVQIRPGVSIPLQLQTLPGTQAQVVTTLP 258


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,384,389
Number of Sequences: 237096
Number of extensions: 1075428
Number of successful extensions: 2121
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)