Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0623.Seq
         (488 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    34   0.003
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   1.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.1  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   4.2  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   4.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   9.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   9.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    22   9.8  
AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine pr...    22   9.8  
AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine pr...    22   9.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 33.9 bits (74), Expect = 0.003
 Identities = 16/89 (17%), Positives = 41/89 (46%)
 Frame = -2

Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
           +R EE  R+  ++   +EREK    ++ RE E +E E      + +      +R+   ++
Sbjct: 452 LREEERAREAREA--AIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQRE 509

Query: 88  EEYSEQNSSNKSFNDGDASADYQTKSKKV 2
            E  E+    ++  + +   + + + +++
Sbjct: 510 REQREKEREREAARERERERERERERERM 538


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = -2

Query: 235 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
           K    VER  + + +    F+ K+   +  RD+ R          S   ++ S  +SS+ 
Sbjct: 408 KQAKEVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSS 467

Query: 55  S 53
           S
Sbjct: 468 S 468


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = -2

Query: 235 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
           K    VER  + + +    F+ K+   +  RD+ R          S   ++ S  +SS+ 
Sbjct: 408 KQAKEVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSS 467

Query: 55  S 53
           S
Sbjct: 468 S 468


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 190 KSREFENKEAESSTYRDKNRSVNSGSER 107
           K  +   +  E STYRDK+ S ++  E+
Sbjct: 699 KDADGNGEGTEESTYRDKDESFDTPEEQ 726


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 290  PRQEPINHQKRRRQA*WLEERRHSRKGKIRI 198
            PR+       RRR A W E +R  R G I++
Sbjct: 1140 PREAARLEDGRRRVARWRERQRMIRNGGIQM 1170


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 78  VNRTPVINPLTTAMHRLTTKP 16
           VN T  + P    +HR+TT+P
Sbjct: 360 VNETLRLYPPVATLHRITTQP 380


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 67  SSVHCTPRLYRNSCVPSHCSLTDSYP 144
           SS HCT +  + SC  +   LT   P
Sbjct: 40  SSAHCTQQTRQASCSDNAAQLTYRLP 65


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 115 SERKSSGKDEEYSEQN-SSNKSFNDGDASAD 26
           SER    +DE  S  N SSN S N+ ++S++
Sbjct: 179 SERIRDSRDERDSLPNASSNNSNNNNNSSSN 209


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 115 SERKSSGKDEEYSEQN-SSNKSFNDGDASAD 26
           SER    +DE  S  N SSN S N+ ++S++
Sbjct: 179 SERIRDSRDERDSLPNASSNNSNNNNNSSSN 209


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 115 SERKSSGKDEEYSEQN-SSNKSFNDGDASAD 26
           SER    +DE  S  N SSN S N+ ++S++
Sbjct: 131 SERIRDSRDERDSLPNASSNNSNNNNNSSSN 161


>AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 380

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 157 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
           + ++R +  SVN      ++ K   + E+N++NK
Sbjct: 117 TGSFRSEAESVNFAESAAAAKKINGWVEENTNNK 150


>AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 157 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
           + ++R +  SVN      ++ K   + E+N++NK
Sbjct: 117 TGSFRSEAESVNFAESAAAAKKINGWVEENTNNK 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,411
Number of Sequences: 2352
Number of extensions: 4964
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)