Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0623.Seq
(488 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 42 3e-04
At3g28770.1 68416.m03591 expressed protein 40 9e-04
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 38 0.004
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 38 0.005
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 37 0.006
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 37 0.006
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 36 0.011
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 36 0.015
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 36 0.015
At5g53800.1 68418.m06685 expressed protein 35 0.026
At2g22795.1 68415.m02704 expressed protein 35 0.026
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 35 0.034
At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong sim... 34 0.045
At3g29075.1 68416.m03637 glycine-rich protein 34 0.045
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 34 0.045
At1g56660.1 68414.m06516 expressed protein 34 0.059
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 33 0.078
At3g59800.1 68416.m06673 expressed protein 33 0.078
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 33 0.10
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 33 0.14
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 33 0.14
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 33 0.14
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 33 0.14
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 32 0.18
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 32 0.18
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 32 0.18
At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containi... 32 0.18
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 32 0.18
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 32 0.18
At4g15030.1 68417.m02309 expressed protein 32 0.24
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 31 0.32
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 31 0.32
At4g11560.1 68417.m01853 bromo-adjacent homology (BAH) domain-co... 31 0.32
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 31 0.32
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 31 0.32
At5g63550.1 68418.m07976 expressed protein 31 0.42
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 31 0.42
At4g33740.2 68417.m04791 expressed protein 31 0.55
At4g33740.1 68417.m04790 expressed protein 31 0.55
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 31 0.55
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 31 0.55
At3g48120.1 68416.m05248 expressed protein 30 0.73
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 30 0.73
At5g53440.1 68418.m06641 expressed protein 30 0.96
At5g47690.1 68418.m05887 expressed protein 30 0.96
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 29 1.3
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 29 1.3
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 1.3
At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein ... 29 1.3
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 29 1.3
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 29 1.3
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 29 1.3
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 29 1.7
At5g58880.1 68418.m07377 hypothetical protein 29 1.7
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 29 1.7
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 29 1.7
At2g12875.1 68415.m01402 hypothetical protein 29 1.7
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 29 1.7
At1g51745.1 68414.m05831 expressed protein 29 1.7
At1g32150.1 68414.m03955 bZIP transcription factor family protei... 29 1.7
At5g60030.1 68418.m07527 expressed protein 29 2.2
At5g44690.1 68418.m05476 hypothetical protein 29 2.2
At4g35940.1 68417.m05113 expressed protein 29 2.2
At2g19870.1 68415.m02323 tRNA/rRNA methyltransferase (SpoU) fami... 29 2.2
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 29 2.2
At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing ... 29 2.2
At5g65490.1 68418.m08236 expressed protein similar to unknown pr... 28 2.9
At5g50840.2 68418.m06299 expressed protein 28 2.9
At5g50840.1 68418.m06298 expressed protein 28 2.9
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 2.9
At5g12230.1 68418.m01435 expressed protein 28 2.9
At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containi... 28 2.9
At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containi... 28 2.9
At3g58050.1 68416.m06471 expressed protein 28 2.9
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 28 2.9
At1g70505.1 68414.m08114 expressed protein 28 2.9
At1g21390.1 68414.m02676 expressed protein 28 2.9
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 28 3.9
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 28 3.9
At4g12610.1 68417.m01987 transcription initiation factor IIF alp... 28 3.9
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 28 3.9
At1g74830.1 68414.m08670 expressed protein contains Pfam profile... 28 3.9
At1g35660.1 68414.m04432 expressed protein 28 3.9
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 27 5.1
At5g05050.1 68418.m00536 peptidase C1A papain family protein wea... 27 5.1
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 5.1
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 27 5.1
At2g32250.2 68415.m03942 far-red impaired responsive protein, pu... 27 5.1
At2g32250.1 68415.m03941 far-red impaired responsive protein, pu... 27 5.1
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 27 5.1
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 27 5.1
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 27 5.1
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 27 5.1
At5g66950.1 68418.m08440 expressed protein 27 6.8
At5g59730.1 68418.m07487 exocyst subunit EXO70 family protein le... 27 6.8
At5g37010.1 68418.m04438 expressed protein 27 6.8
At5g15430.1 68418.m01806 calmodulin-binding protein-related has ... 27 6.8
At4g37210.2 68417.m05267 tetratricopeptide repeat (TPR)-containi... 27 6.8
At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containi... 27 6.8
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 27 6.8
At3g11590.1 68416.m01416 expressed protein 27 6.8
At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family pr... 27 6.8
At2g35210.1 68415.m04319 human Rev interacting-like family prote... 27 6.8
At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate syntha... 27 6.8
At1g76770.1 68414.m08934 heat shock protein-related contains sim... 27 6.8
At1g63420.1 68414.m07172 expressed protein 27 6.8
At1g22882.1 68414.m02857 expressed protein 27 6.8
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 27 6.8
At1g07980.1 68414.m00869 histone-like transcription factor (CBF/... 27 6.8
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 27 6.8
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 27 9.0
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 27 9.0
At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At1g69070.1 68414.m07903 expressed protein 27 9.0
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 27 9.0
At1g26680.1 68414.m03250 transcriptional factor B3 family protei... 27 9.0
At1g13350.1 68414.m01550 protein kinase family protein contains ... 27 9.0
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK----SSGKDEE 83
K DG + + ++ +SN KS + + ++ S + + + NS S++K SS K +
Sbjct: 1175 KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDGDSSSKSHK 1234
Query: 82 YSEQNSSNKSF--NDGDASADYQTKS 11
++ +SS+KS NDGD+S+ KS
Sbjct: 1235 KNDGDSSSKSHKKNDGDSSSKSHKKS 1260
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 71
K DG + + ++ +SN KS + + ++ S + + + NS S +KS G S +
Sbjct: 1139 KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSK 1198
Query: 70 NSSNKSFNDGDASADYQTKSK 8
S S + +D T SK
Sbjct: 1199 KSDGDSCSKSQKKSDGDTNSK 1219
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG----KDEE 83
K DG + + ++ +SN KS + + ++ S + + + NS S +KS G K +
Sbjct: 1127 KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSK 1186
Query: 82 YSEQNSSNKSF--NDGDASADYQTKS 11
S+ +S++KS +DGD+ + Q KS
Sbjct: 1187 KSDGDSNSKSSKKSDGDSCSKSQKKS 1212
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG----KDEE 83
K DG + + ++ +SN KS + + ++ S + + + NS S +KS G K ++
Sbjct: 1151 KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQK 1210
Query: 82 YSEQNSSNKSFNDGDASADYQTKSK 8
S+ ++++KS GD + ++ K
Sbjct: 1211 KSDGDTNSKSQKKGDGDSSSKSHKK 1235
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG----KDEE 83
K DG + + ++ +SN KS + + ++ S + + + S S++KS G K ++
Sbjct: 1163 KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQK 1222
Query: 82 YSEQNSSNKSF--NDGDASADYQTKS 11
+ +SS+KS NDGD+S+ K+
Sbjct: 1223 KGDGDSSSKSHKKNDGDSSSKSHKKN 1248
Score = 36.7 bits (81), Expect = 0.008
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
++ EG + S + S+S+KKS N ++ + D N + S+ S+ K
Sbjct: 1113 LKKNEGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKS 1172
Query: 88 EEYSEQNSSNKSF--NDGDASADYQTKS 11
+ S+ +S++KS +DGD+++ KS
Sbjct: 1173 SKKSDGDSNSKSSKKSDGDSNSKSSKKS 1200
Score = 34.7 bits (76), Expect = 0.034
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -2
Query: 286 DRNQ*IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER 107
D N + +G + S + S+S+KKS N ++ + D N + S+
Sbjct: 1131 DSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDG 1190
Query: 106 KSSGKDEEYSEQNSSNKS--FNDGDASADYQTK 14
S+ K + S+ +S +KS +DGD ++ Q K
Sbjct: 1191 DSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKK 1223
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.9 bits (89), Expect = 9e-04
Identities = 24/97 (24%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = -2
Query: 280 NQ*IIRNEEGKRDGSKSGVTVEREKSESNKKSREFEN---KEAESSTYRDK-NRSVNSGS 113
N + + E+ K++ +KS + +E+++ NK+ +E E+ K E Y +K +++
Sbjct: 968 NNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAK 1027
Query: 112 ERKSSGKDEEYSEQNSSN-KSFNDGDASADYQTKSKK 5
+ K +D++ E++S KS + + S D + K K+
Sbjct: 1028 KEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKE 1064
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSE-SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
N+E K S+ + REK E KKS+ E + E +DK R ERKS + E
Sbjct: 996 NKEKKE--SEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKE 1053
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSKK 5
E + + K + KSKK
Sbjct: 1054 ESRDLKAKKKEEETKEKKESENHKSKK 1080
Score = 33.1 bits (72), Expect = 0.10
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSR--------EFENKE----AESSTYRDKNRSVNS 119
N + K + K V E +K E NKK + ENK+ ES KNR
Sbjct: 955 NMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKE 1014
Query: 118 GSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
E+KS K+E E+ S + S + ++K +K
Sbjct: 1015 YEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEK 1052
Score = 32.7 bits (71), Expect = 0.14
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = -2
Query: 280 NQ*IIRNEEGKRDGSKS-GVTVEREKSESNKKSREFE---NKEAESSTYRD--KNRSVNS 119
N+ +RN+E G+K VE+ + + +K ++ E NK+ S+ RD K RS
Sbjct: 764 NENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGED 823
Query: 118 GSERKSSGKDEEYSEQNSSNKS 53
E K KD + E N++
Sbjct: 824 NKEDKEESKDYQSVEAKEKNEN 845
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVE-REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
N+E K + SK +VE +EK+E+ NKE D++ V + E K E
Sbjct: 824 NKEDKEE-SKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMKKKRE 882
Query: 85 EYSEQN-SSNKSFND 44
E + SS K D
Sbjct: 883 EVQRNDKSSTKEVRD 897
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKN 134
E K DGS +E ++ + + ++ ENKE+++ + DK+
Sbjct: 684 EVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKS 725
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 217 EREKSESNKKSREFE--NKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
+R+KSES K+ E E KEA ST +++ R S S+++S G++E E + S K
Sbjct: 733 KRKKSESKKEGGEGEETQKEANESTKKERKRK-KSESKKQSDGEEETQKEPSESTK 787
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 37.5 bits (83), Expect = 0.005
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYR-DKNRSVNSGSE---RKSSG 95
NEE K D KSG EK+ES ++ +EF++K + D + S S+ +K
Sbjct: 93 NEE-KTDPEKSGEENSGEKTESAEERKEFDDKNGDGDRKNGDGEKDTESESDETKQKEKT 151
Query: 94 KDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
+ EE SE+N S S + + + + ++K
Sbjct: 152 QLEESSEENKSEDSNGTEENAGESEENTEK 181
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 37.1 bits (82), Expect = 0.006
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS-VNSGSERKSSGKD 89
R++E ++D S+ V E++K + + ++ EN E ++ +DK+R+ V + +KS D
Sbjct: 82 RDKEREKDKSRDRVK-EKDKEKERNRHKDREN-ERDNEKEKDKDRARVKERASKKSHEDD 139
Query: 88 EEYSE-----QNSSNKSFNDGDASADYQTKSKK 5
+E + ++S N+ N+G + D + K+
Sbjct: 140 DETHKAAERYEHSDNRGLNEGGDNVDAASSGKE 172
Score = 33.1 bits (72), Expect = 0.10
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -2
Query: 265 RNEEGKRD-GSKSGVTVEREKSESNKKSRE-FENKEAESSTYRDKNRSVNSGSERKSSGK 92
R+ + RD ++ ++ R+K KSR+ + K+ E R K+R N K K
Sbjct: 64 RDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRE-NERDNEKEKDK 122
Query: 91 DEEYSEQNSSNKSFNDGD 38
D ++ +S KS D D
Sbjct: 123 DRARVKERASKKSHEDDD 140
Score = 31.1 bits (67), Expect = 0.42
Identities = 24/95 (25%), Positives = 41/95 (43%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 110
+D ++ IR+++ +RD K ++ K+ +KE E RD+ + + E
Sbjct: 44 KDYDREKIRDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKE 103
Query: 109 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
R + KD E N K D D + + SKK
Sbjct: 104 R-NRHKDRENERDNEKEK---DKDRARVKERASKK 134
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK-SSGK 92
+R R K + ++EK +K R+ +++ + RD+ RS + +E++ S G+
Sbjct: 24 VREHRDGRRKEKDHRSKDKEKDYDREKIRDKDHRR-DKEKERDRKRSRDEDTEKEISRGR 82
Query: 91 DEEYSEQNSSNK 56
D+E + S ++
Sbjct: 83 DKEREKDKSRDR 94
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 80
E+G+RD + ++ ++SRE N+E++ RD R G ERK +++
Sbjct: 178 EDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSV 237
Query: 79 S-----EQNSSNKSFNDGDASADYQTKSKKV 2
E + KS D + +T+ +++
Sbjct: 238 GRSSRHEDSPKRKSVEDNGEKKEKKTREEEL 268
Score = 30.7 bits (66), Expect = 0.55
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R E+ +R E + + + RE ++ RDK+R RKSS ++
Sbjct: 44 RREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSED 103
Query: 85 EYSEQNSSNK 56
+ E++ +K
Sbjct: 104 DVEEEDERDK 113
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 220 VEREKSESNKKSREFENKEAE-SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
+E EKS+ + + +EA+ + RD++R +ERK E+ E++ K
Sbjct: 1 MEVEKSKYRSEDLDVVEEEADLKKSRRDRDR----SNERKKDKGSEKRREKDRRKKRVKS 56
Query: 43 GDASADY 23
D+ DY
Sbjct: 57 SDSEDDY 63
Score = 27.1 bits (57), Expect = 6.8
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVE--REKSESNKKSR---EFEN-------KEAESSTY 146
RD+++ R+E K S+ V E R+K N+K R E E ++ E
Sbjct: 84 RDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRKRDREREER 143
Query: 145 RDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
+DK R ER+ ++E E+ + D D + + K+
Sbjct: 144 KDKEREREKDRERREREREEREKERVKERERREREDGERDRREREKE 190
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/87 (21%), Positives = 38/87 (43%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R+ E K+D G REK + KK + + E + D+ R ER+ +D+
Sbjct: 31 RSNERKKD---KGSEKRREK-DRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDK 86
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSKK 5
+ ++ S + +D + + + + K
Sbjct: 87 DRVKRRSERRKSSDSEDDVEEEDERDK 113
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 83
+ G++ S++G R + E R+ E + + T R ++RSV ++ K +DEE
Sbjct: 618 SSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRT-RSRSRSVEDSADIKDKSRDEE 676
Query: 82 YSEQNSSNKSFNDGDASADYQT 17
++S + D S T
Sbjct: 677 LKHHKKRSRSRSREDRSKTRDT 698
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/74 (27%), Positives = 28/74 (37%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
++ EGKR +K T R+K + R + +E RD S E+KS K
Sbjct: 794 KSVEGKRSYNKE--TRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKSRHKRH 851
Query: 85 EYSEQNSSNKSFND 44
S S D
Sbjct: 852 SRSRSIEKKNSSRD 865
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 35.9 bits (79), Expect = 0.015
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 80
E+ K+D K+ ++EK + +K+ +E ++KE + +DK ERK + E+
Sbjct: 62 EQEKKDKEKAAKD-KKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEK- 119
Query: 79 SEQNSSNKSFNDGDASADYQTKS 11
+ K + +A+A Y+ S
Sbjct: 120 ERKAKEKKDKEESEAAARYRILS 142
Score = 35.1 bits (77), Expect = 0.026
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
++ ++GK D KS ++K E KK +E K+ + +DK ERK K
Sbjct: 41 VQVDKGKGDNGKSNGNGPKDK-EQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKK 99
Query: 88 EEYSEQNSSNKSFNDGDASADYQTKSKK 5
++ ++ + + + K KK
Sbjct: 100 DKLEKEKKDKERKEKERKEKERKAKEKK 127
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 35.9 bits (79), Expect = 0.015
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTV-EREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSGKD 89
+EE ++D K TV E E+ + K +EFE ++ + RD++ G++ + G+
Sbjct: 134 SEEKEKDNGKENQTVQESEEGQMKKVVKEFEKEQKQQ---RDEDAGTQPKGTQGQEQGQG 190
Query: 88 EEYSEQNSSNKSFNDGDASAD 26
+E + NK + D++ D
Sbjct: 191 KEQPDVEQGNKQGQEQDSNTD 211
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 35.1 bits (77), Expect = 0.026
Identities = 24/86 (27%), Positives = 34/86 (39%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R+ +RD S S E SES + + E E+E R K + E K +
Sbjct: 95 RSRRRRRDYSSSSSDSE---SESESEYSDSEESESEDERRRRKRKRKEREEEEKERKRRR 151
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSK 8
++ NKS DGD + K K
Sbjct: 152 REKDKKKRNKSDKDGDKKRKEKKKKK 177
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 35.1 bits (77), Expect = 0.026
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -2
Query: 256 EGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDK--NRSVNSGSERKSSGKDEE 83
E K+D + + E+ +E ++ + +N +E S +K NR ++ E K DE+
Sbjct: 232 EEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEK 291
Query: 82 YSEQNSSNKSFNDGDASADYQTKSKK 5
+ + + ++ DAS++ +S++
Sbjct: 292 ANIEEARENNYKGDDASSEVVHESEE 317
Score = 35.1 bits (77), Expect = 0.026
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Frame = -2
Query: 280 NQ*IIRNEEGKRDGSKSGVTV--EREKSESNKKSREFEN---KEAESSTYRDKNRSVNSG 116
N+ I + E ++ SK T E+E+S S ++++E EN ++ ES+ + N
Sbjct: 544 NEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEK 603
Query: 115 SERKSSGKDEEYSEQNSSNK---SFNDGDASADYQTKSKK 5
E++ S EE E+ + K + ++ + T+S+K
Sbjct: 604 IEKEESASQEETKEKETETKEKEESSSNESQENVNTESEK 643
Score = 33.1 bits (72), Expect = 0.10
Identities = 17/77 (22%), Positives = 41/77 (53%)
Frame = -2
Query: 235 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
K +E+E+S ++++E EN++ E ++++ S E+++ K++E S N S +
Sbjct: 580 KENEKIEKEESAPQEETKEKENEKIE----KEESASQEETKEKETETKEKEESSSNESQE 635
Query: 55 SFNDGDASADYQTKSKK 5
+ N + +++K
Sbjct: 636 NVNTESEKKEQVEENEK 652
Score = 33.1 bits (72), Expect = 0.10
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 83
NE+ ++ E S+ K +E E KE E S+ + +VN+ SE+K ++ E
Sbjct: 601 NEKIEK---------EESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENE 651
Query: 82 YSEQNSSNKSFNDGDASADYQTKSKK 5
+++S + S Q +S++
Sbjct: 652 KKTDEDTSESSKENSVSDTEQKQSEE 677
Score = 32.7 bits (71), Expect = 0.14
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE--RKSSGK 92
++ G + KSG T E E E + EN+++ S + + N G+E R+ SG
Sbjct: 191 KDNGGTEENEKSG-TEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGT 249
Query: 91 DEEYSEQNSSNKSFNDGD 38
+E E+ N S + +
Sbjct: 250 EESEVEEKKDNGSSEESE 267
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKDE 86
N G + KSG T E E E EN+++ + + R N G+ E + SG +E
Sbjct: 148 NGGGTEENEKSG-TEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEE 206
Query: 85 EYSEQNSSNKSFNDGDASADYQTK 14
E+ N + + S +++
Sbjct: 207 SEVEERKENGGTEENEKSGSEESE 230
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-SERKSSGKDEE 83
E + ++G T E EKS S + E + + R+K+ + S E+K +G EE
Sbjct: 206 ESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEE 265
Query: 82 YS-EQNSSNKSFNDGDASADYQTKSK 8
E+ N+ ++ + S + K
Sbjct: 266 SEVEEKKENRGIDESEESKEKDIDEK 291
Score = 30.7 bits (66), Expect = 0.55
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESN----KKSREFENKE-AESSTYRDKNRSVNSGSERKSSG 95
E ++ +K + EK E++ K E E KE ESS+ + N E++ S
Sbjct: 532 ESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESA 591
Query: 94 KDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
EE E+ N+ ++++ +TK K+
Sbjct: 592 PQEETKEK--ENEKIEKEESASQEETKEKE 619
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
+NE+ + + +S E ++ E K +E E+ E + ++ N S + KD+
Sbjct: 484 KNEDKETEKIESSFLEETKEKEDETKEKE-ESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSKK 5
E + S + + +TK K+
Sbjct: 543 ENEKIEKEEASSQEESKENETETKEKE 569
Score = 29.9 bits (64), Expect = 0.96
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKD 89
++ G + KSG T E E E EN+++ + + R N G+ E + SG +
Sbjct: 169 KDNGGTEENEKSG-TEESEVEERKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSE 227
Query: 88 EEYSEQNSSN 59
E E+ N
Sbjct: 228 ESEVEEKKDN 237
Score = 26.6 bits (56), Expect = 9.0
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 256 EGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-SERKSSGKDEEY 80
E KRD G T E EKS + + E E K+ + +K+ + S ERK +G EE
Sbjct: 143 EEKRDNG--GGTEENEKSGTEESEVE-ERKDNGGTEENEKSGTEESEVEERKDNGGTEE- 198
Query: 79 SEQNSSNKS 53
+E++ + +S
Sbjct: 199 NEKSGTEES 207
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 34.7 bits (76), Expect = 0.034
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSG----SERKSSGKDEEYSEQNSSNKSFN 47
+EK E S ++E +S R+K+ SG S +SSG + N ++ N
Sbjct: 801 KEKVEEKTSSLTLGSEEEKSRKKREKSPGKRSGGNDLSSSESSGDERRRKRYNKKDRHRN 860
Query: 46 D--GDASADYQTKSKK 5
D D+S+DY ++ K+
Sbjct: 861 DSESDSSSDYHSRDKQ 876
>At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong
similarity to RNA helicase RH26 [Arabidopsis thaliana]
GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain; identical to cDNA DEAD box RNA helicase, RH26
GI:3776024
Length = 850
Score = 34.3 bits (75), Expect = 0.045
Identities = 21/83 (25%), Positives = 44/83 (53%)
Frame = -2
Query: 253 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 74
G R+GS++G V+ + SES+ + R N ++ SS +++V+SGS + S
Sbjct: 179 GDREGSRNG-RVQGKSSESSFRGRSDRNVDSGSSFRGRSDKNVDSGSSFRGRNDRNVDSG 237
Query: 73 QNSSNKSFNDGDASADYQTKSKK 5
+ +S + D+ + ++ +S +
Sbjct: 238 SSFRGRSDRNVDSGSSFRGRSDR 260
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 34.3 bits (75), Expect = 0.045
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 211 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
EKS+ +K ++ + K+ +++ D+ + + K D++Y E+ K +ND D
Sbjct: 159 EKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDD 216
Score = 31.9 bits (69), Expect = 0.24
Identities = 15/78 (19%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFE--NKEAESSTYRDKNRSVNSGSERKSSGK 92
+ +E K+D K G E ++ + KK +++ + + + + K + N E+K
Sbjct: 164 KEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDDEKKKKKH 223
Query: 91 DEEYSEQNSSNKSFNDGD 38
+ ++ ++ND D
Sbjct: 224 YNDDDDEKKKKHNYNDDD 241
Score = 30.7 bits (66), Expect = 0.55
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -2
Query: 244 DGSKSGVTVEREKSESNKK----SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 77
DG + E+EK + KK S + E K+ + ++ + E+K KD
Sbjct: 156 DGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDD 215
Query: 76 EQNSSNKSFNDGD 38
++ K +ND D
Sbjct: 216 DEKKKKKHYNDDD 228
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 34.3 bits (75), Expect = 0.045
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R EE + S +++ K E K + E E + + + S + E K S + E
Sbjct: 1466 RGEEKGTAENVSSTKIQQTKDELEKPRKPSEISE-NHNIHEFMDSSQSQDIEEKGSDQAE 1524
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSK 8
+Y++QN + ND D +Y +
Sbjct: 1525 KYAKQNKIQEVMNDEDKKEEYHISER 1550
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/85 (22%), Positives = 36/85 (42%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 80
EE DG K + V K+E+NK R E +E + DK + ++ G+ ++
Sbjct: 666 EEKVCDGGKGIIAVAETKAENNKSKRVQETEEQK----LDKEDTCGKHFQKLIEGEISDH 721
Query: 79 SEQNSSNKSFNDGDASADYQTKSKK 5
E K +A + ++++
Sbjct: 722 GEVEDVEKGKKRTEAEKRIKDRARE 746
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 33.9 bits (74), Expect = 0.059
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKS--ESNKKSREFENKEAESSTYR-DKNRSVNSGSERKSSGK 92
++E K SK E+++S E KK + E KE + ST + DK G K +
Sbjct: 239 DQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKE 298
Query: 91 DEEYSEQNSSNKSFNDGDASADYQTKSKK 5
DE + D +AD++ KK
Sbjct: 299 DEGKKTKEHDATEQEMDDEAADHKEGKKK 327
Score = 29.9 bits (64), Expect = 0.96
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKK----SREFENKEAESSTYRDKNRSVNSGSE-RKS 101
+ ++ K++ +SG + +K++ KK S+E E E E K SG+E +K
Sbjct: 133 KKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKK 192
Query: 100 SGKDE-EYSEQNSSNK 56
K E + E++ SN+
Sbjct: 193 KPKKEKKQKEESKSNE 208
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = -2
Query: 256 EGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR-SVNSGSERKSSGKDEEY 80
E +++G K E+++S +K+++ + ++ ++K G + K KDE
Sbjct: 127 EEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESG 186
Query: 79 SEQ-----NSSNKSFNDGDASADYQTKSKK 5
+E+ K + ++ D + K KK
Sbjct: 187 TEEKKKKPKKEKKQKEESKSNEDKKVKGKK 216
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -2
Query: 217 EREKSESNKKSREF--ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
E + +E KKS+ E++E + +DK ++ ++ +DEE + +S +
Sbjct: 407 EEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDSKDVKIEG 466
Query: 43 GDASADYQTKSKK 5
A + + K K
Sbjct: 467 SKAKEEKKDKDVK 479
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 33.5 bits (73), Expect = 0.078
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = -2
Query: 286 DRNQ*-IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 110
+RNQ II +E + D +S R +++S R+ +E + RD++R + +
Sbjct: 848 NRNQKSIIERKEKREDSQESSKKRHRGENKSQSPPRKSSTRERDHDLGRDRDRERHRDRD 907
Query: 109 RKSSGKDEEYSEQNSSNKSFNDGDASAD 26
R+ + + SS+ +D D S +
Sbjct: 908 RQHDLNRDRDRREKSSSHDRDDNDRSKE 935
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 33.5 bits (73), Expect = 0.078
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = -2
Query: 271 IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 92
++R + D +S + + + ++ S+ KSR+ + K+ +S + K R S SE SS
Sbjct: 79 LMREYRAQLDAERS-LKLSKGRNYSSDKSRK-DKKDRDSKKKKSKKRKHYSSSESSSSSD 136
Query: 91 DEEYSEQNSSNK 56
++E SS+K
Sbjct: 137 EDESRRSRSSSK 148
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 33.1 bits (72), Expect = 0.10
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -2
Query: 262 NEEG-KRDGSKSGVT--VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 92
N+EG K + K G T E EK + +K+ E ENKEAE + ++ V++ K +G
Sbjct: 170 NKEGEKTEAGKEGQTEIAEAEKEKEGEKA-EAENKEAEVVRDKKESMEVDTSELEKKAGS 228
Query: 91 DEEYSE 74
E E
Sbjct: 229 GEGAEE 234
Score = 32.3 bits (70), Expect = 0.18
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = -2
Query: 262 NEEGKRDGSKSGVT----VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 95
N E +++ K GVT E+E +E K E NKE E + + ++ + +E++ G
Sbjct: 136 NAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEKEKEG 195
Query: 94 KDEEYSEQNSSNKSFNDGDASADYQT 17
E+ +N + D S + T
Sbjct: 196 --EKAEAENKEAEVVRDKKESMEVDT 219
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 32.7 bits (71), Expect = 0.14
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
++ E + S V EK +KSR NKE + + RS E + GK
Sbjct: 202 VKLESLQNPSSNHDDRVSSEKGNFKEKSRPGGNKERQEPSVEGSTRS----GENRKDGKS 257
Query: 88 EEYSEQNSSNKSFNDGDAS 32
+ S NSS S ++ D S
Sbjct: 258 SKSSSSNSSAVSESESDDS 276
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 32.7 bits (71), Expect = 0.14
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVER--EKSESNKKSREFENKEAESSTYRDKNRSVNSG 116
+DR + R+++ +RD S + +R EKS+ + ++ +++E + R ++ S G
Sbjct: 52 KDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERG 111
Query: 115 SERKSSGKDEE 83
R+ G+D++
Sbjct: 112 ERRERGGRDDD 122
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGS 113
RD + R+++ +R+ G +RE+ SE +++SR+ + ++++ + RDK+R
Sbjct: 42 RDHERETSRSKDRERE---KGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERH 97
Query: 112 ERKSSGKDEEYSEQNSSNKSFNDGD 38
R S +D + D D
Sbjct: 98 HRSSRHRDHSRERGERRERGGRDDD 122
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 32.7 bits (71), Expect = 0.14
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVER--EKSESNKKSREFENKEAESSTYRDKNRSVNSG 116
+DR + R+++ +RD S + +R EKS+ + ++ +++E + R ++ S G
Sbjct: 52 KDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERG 111
Query: 115 SERKSSGKDEE 83
R+ G+D++
Sbjct: 112 ERRERGGRDDD 122
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGS 113
RD + R+++ +R+ G +RE+ SE +++SR+ + ++++ + RDK+R
Sbjct: 42 RDHERETSRSKDRERE---KGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERH 97
Query: 112 ERKSSGKDEEYSEQNSSNKSFNDGD 38
R S +D + D D
Sbjct: 98 HRSSRHRDHSRERGERRERGGRDDD 122
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 32.7 bits (71), Expect = 0.14
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVER--EKSESNKKSREFENKEAESSTYRDKNRSVNSG 116
+DR + R+++ +RD S + +R EKS+ + ++ +++E + R ++ S G
Sbjct: 52 KDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERG 111
Query: 115 SERKSSGKDEE 83
R+ G+D++
Sbjct: 112 ERRERGGRDDD 122
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGS 113
RD + R+++ +R+ G +RE+ SE +++SR+ + ++++ + RDK+R
Sbjct: 42 RDHERETSRSKDRERE---KGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERH 97
Query: 112 ERKSSGKDEEYSEQNSSNKSFNDGD 38
R S +D + D D
Sbjct: 98 HRSSRHRDHSRERGERRERGGRDDD 122
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
+ E SES ++ E+E +E E + R +S E + +++E E+ SN+ ++D D
Sbjct: 516 QMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDE-EERGKSNR-YSDED 573
Query: 37 ASADYQTKSKK 5
+ +++K
Sbjct: 574 EEEEEGGRAEK 584
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 32.3 bits (70), Expect = 0.18
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVERE-------KSESNKKSREFENKEAESSTYRDKNRSVNSGSE 110
+ +EEG ++ V+ ++E + E K E KEAE + + N N+G
Sbjct: 83 VEDEEGSKNEGGGDVSTDKENGDEIVEREEEEKAVEENNEKEAEGTGNEEGNEDSNNGES 142
Query: 109 RKSSGKDE---EYSEQNSSNKSFNDGDASAD 26
K + E E S + + ++ DAS++
Sbjct: 143 EKVVDESEGGNEISNEEAREINYKGDDASSE 173
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -2
Query: 262 NEEGKRDGSKSGV---TVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 92
+++G++ +KS + T E+ S+SN + E + ++ + + S SGS KS+G
Sbjct: 231 SDDGEQQETKSELDSKTGEKGFSDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGY 290
Query: 91 DEEYSEQNSSNK 56
+ +E++ K
Sbjct: 291 QQTKNEEDEKEK 302
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 53
E E E S + EN+ E+ + S G+E K + K S++ + S
Sbjct: 371 EPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNS 425
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -2
Query: 268 IRNEEGKRDGSKS-GVTVEREKSESNKKSREFE---NKEAESSTYRDKNRSVNSGSERKS 101
I +EEG+ DG+K+ VT + E S KK + E EA +K +++ +E K+
Sbjct: 51 ISDEEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKA 110
Query: 100 SG 95
G
Sbjct: 111 EG 112
>At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 208
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -2
Query: 268 IRNEEGKRDGSKS-GVTVEREKSESNKKSREFE---NKEAESSTYRDKNRSVNSGSERKS 101
I +EEG+ DG+K+ VT + E S KK + E EA +K +++ +E K+
Sbjct: 51 ISDEEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKA 110
Query: 100 SG 95
G
Sbjct: 111 EG 112
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -2
Query: 217 EREKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 41
ER+K + KK R E + +EAE R+K S S+ K K E+ +++ + +
Sbjct: 7 ERKKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEE 66
Query: 40 DASADYQTKSKK 5
+ S KK
Sbjct: 67 EKSPSPSPSPKK 78
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles PF01846:
FF domain, PF00397: WW domain
Length = 946
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -2
Query: 217 EREKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 41
E+E+ +K R E E E E +DK R K GK+ E++ + +
Sbjct: 796 EKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVS 855
Query: 40 DASADYQTKSK 8
+ D + K K
Sbjct: 856 EGHKDEKRKGK 866
>At4g15030.1 68417.m02309 expressed protein
Length = 179
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
E E+SESN+K ++ N+ S Y G RKS K E + +++F++
Sbjct: 114 EGERSESNEKKKQKRNRSQSHSEYDTDEEDRRKGKTRKS--KLESADREGKDDENFDE 169
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKE---AESSTYRDKN-RSVNSGSERKS 101
+ ++EG+ + G T E ++ +S + E ENKE ES + D N + SG E
Sbjct: 49 MEDDEGESEEDDEGDTEEDDEGDSEEDD-EGENKEDEDGESEDFEDGNDKESESGDEGND 107
Query: 100 SGKDEEYSE 74
KD + E
Sbjct: 108 DNKDAQMEE 116
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE--------RKSSGKDEEYSEQNSS 62
+ E SES ++ E+E +E E + R +S E + GK YS+++
Sbjct: 516 QMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDEEERGKSNRYSDEDEE 575
Query: 61 NKSFNDGDASADYQTKSKK 5
+ G A D++ +K
Sbjct: 576 EEEVAGGRAEKDHRGSGRK 594
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R ++ + + + E E+ +SN+ S E E +E + +K+ SG +RK DE
Sbjct: 544 RGKDSEDEYEEDAEEDEEERGKSNRYSDEDEEEEEVAGGRAEKDHR-GSGRKRKGIESDE 602
Query: 85 EYS 77
E S
Sbjct: 603 EES 605
>At4g11560.1 68417.m01853 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 587
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
I +G+ S +R K ++ K +FE KEA+ R K R N E + G D
Sbjct: 20 ITRSKGRNSASPEESLGKRRKRKTVKLYEDFEEKEAD----RKKKRKGNKEDEDMAEGDD 75
Query: 88 EEYSEQNS 65
++ E+ +
Sbjct: 76 DQAEEETN 83
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -2
Query: 223 TVEREKSESNKKSREFENKEAESSTYR-DKNRSVNSGSERKSSGKDEEYSEQNSSNK-SF 50
TV R +S N + E E + +TYR DK +S G++ S+G ++ + + ++
Sbjct: 701 TVRRLQSSQNPQEEEEEAISKDKNTYRSDKGKSQVVGTDSSSTGSKQQRKKTSKFHRVRL 760
Query: 49 NDGDASA 29
DG +A
Sbjct: 761 GDGSMAA 767
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 31.5 bits (68), Expect = 0.32
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Frame = -2
Query: 295 IFRDRNQ*IIRNEEGKRDGSKSGVTV-----EREKSESNKKSREFENKEAESSTYRDKNR 131
I RDR EE +RD + G ER++ R+ E +E E R K +
Sbjct: 48 IRRDRKSSDFEEEEYERDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQK 107
Query: 130 SVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 2
S + D + + + GD + +T+ ++V
Sbjct: 108 KERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDEQV 150
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 31.1 bits (67), Expect = 0.42
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 309 DTDDKYSETGTNKSSETKKASVMARRAASQSKGKNPNPT 193
DTDD+ E K S+ K +S +S SKGK+ P+
Sbjct: 323 DTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS 361
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 31.1 bits (67), Expect = 0.42
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 211 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 50
EKS+ K + E+E+S+ + S +S SE + S +DE E+N + F
Sbjct: 233 EKSDEAKGEMDSAESESETSS-SSASSSDSSSSEEEESDEDESDKEENKKEEKF 285
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 30.7 bits (66), Expect = 0.55
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = -2
Query: 280 NQ*IIRNEEGKRDGSKSGVTVERE-KSESNKKSREFENKEAES---STYRDKNRSVNSGS 113
N+ + +E + + S G E++ K E+ E E E E DKN+ +
Sbjct: 84 NEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVA 143
Query: 112 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 17
E E E + ++S N GD D +T
Sbjct: 144 EEDEEENKHEEDEIDEQDQSKNAGDTDKDDET 175
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 30.7 bits (66), Expect = 0.55
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = -2
Query: 280 NQ*IIRNEEGKRDGSKSGVTVERE-KSESNKKSREFENKEAES---STYRDKNRSVNSGS 113
N+ + +E + + S G E++ K E+ E E E E DKN+ +
Sbjct: 84 NEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVA 143
Query: 112 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 17
E E E + ++S N GD D +T
Sbjct: 144 EEDEEENKHEEDEIDEQDQSKNAGDTDKDDET 175
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 30.7 bits (66), Expect = 0.55
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSGKDE 86
N + D + T E E N EN E + D+ S+ +G+E + SG ++
Sbjct: 181 NGNDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESGNED 240
Query: 85 EYSEQNSS 62
E+N S
Sbjct: 241 HSMEENGS 248
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = -2
Query: 262 NEEGKRDGSK--SGVTVEREKSESNKKSREFENKEAESSTYR--DKNRSVNSGSERKSSG 95
+EE + D ++ +G E E + + EN E + D+N N G++ ++
Sbjct: 161 DEETENDNTEEENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEEN-GNDEENEK 219
Query: 94 KDEEYSEQNSSNKSFNDGD 38
+DEE S + + N+S G+
Sbjct: 220 EDEENSMEENGNESEESGN 238
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 30.7 bits (66), Expect = 0.55
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 110
RD++ R+ E RD KS +REKS + RE +RD++R +
Sbjct: 58 RDKDGNKDRDREKDRDREKSRDR-DREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERS 116
Query: 109 RKSSGKDEEY--SEQNSSNKSFNDGDASADYQTKSK 8
K D+++ ++ + D D ++ +S+
Sbjct: 117 EKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSR 152
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTY--RDKNRSVNSGSERKSSGKDE 86
E R+ S+ RE+ E +K R S+Y R++ RS + +ER++ D
Sbjct: 88 ERSYRESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDR 147
Query: 85 EYSEQNSSNKSFN 47
E +++ ++S +
Sbjct: 148 ESRRRSNRSRSLS 160
Score = 30.3 bits (65), Expect = 0.73
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 110
R+R++ + R + V+RE+ S +S E N+ + + R NRS S S
Sbjct: 103 RERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRRRSNRS-RSLSP 161
Query: 109 RKSSGKDEEYSEQNSSNKSFNDG--DASADYQTKSK 8
R+ E+ E+ G + SA + K+K
Sbjct: 162 RRERRSREDVKEKKPDYSRLIKGYDEMSAAEKVKAK 197
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 30.3 bits (65), Expect = 0.73
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREK---SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 98
+R EEG RD E +E+N+ + EN + +G ERK S
Sbjct: 64 LRKEEGDRDPKNFSDEKNEENEAATENNQVKTDSENSAEGNQVNESSGEKTEAGEERKES 123
Query: 97 GKDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
D K+ + + +D T+ +K
Sbjct: 124 -DDNNGDGDGEKEKNVKEVGSESDETTQKEK 153
Score = 30.3 bits (65), Expect = 0.73
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = -2
Query: 286 DRNQ*IIRNEEGKRDGSKS--GVTVER---EKSESNKKSREFENKEAESSTYRDKN-RSV 125
+ N+ N + K D S G V EK+E+ ++ +E ++ + ++KN + V
Sbjct: 82 EENEAATENNQVKTDSENSAEGNQVNESSGEKTEAGEERKESDDNNGDGDGEKEKNVKEV 141
Query: 124 NSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 26
S S+ + + + E NKS DG+ + +
Sbjct: 142 GSESDETTQKEKTQLEESTEENKS-EDGNGNEE 173
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 35
R++ +++ R + ++ S Y + S ER + +Q+ K DG
Sbjct: 367 RDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRR 426
Query: 34 SADYQ 20
S DYQ
Sbjct: 427 SPDYQ 431
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 29.9 bits (64), Expect = 0.96
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -2
Query: 247 RDGSKSGVTVEREKSES-NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY--- 80
+D KS +++E EK ES NKK R + E S + +S + G K DEE
Sbjct: 1525 KDTPKS-LSLEHEKVESRNKKRRSSALPKTEYSGEAGEEKSESEGKSLKEGEDDEEVVNK 1583
Query: 79 SEQNSSNKSFNDGDA 35
E K+ + GDA
Sbjct: 1584 EEDLQEAKTESSGDA 1598
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -2
Query: 202 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADY 23
E+ +K + +NKE E N++ + E+K KD++ ++N +K+ G+ D
Sbjct: 3 ETEEKVKNHDNKEEEH------NKAEKA--EKKEKKKDKDKKDKNEDDKN-GGGEEGEDQ 53
Query: 22 QTKSKK 5
+ KSKK
Sbjct: 54 EKKSKK 59
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
+++ +E+ + +++ + E+S +N+S+ E K KD+ +E+ S+N S G
Sbjct: 576 QKKYAEAMLQKQQYSGQVKEASEL--ENKSMKEVDESKKDLKDKAANEEQSNNSSRPSGS 633
Query: 37 ASADYQTKSKK 5
A+ SK+
Sbjct: 634 GEAEKVIISKE 644
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVT----VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 101
+ N EG+ S V VE+E + + ++K+ +DKNR N K
Sbjct: 714 VENSEGRSRPVSSKVKDSEQVEKEDNSDLDANLSCDSKDTIRHQIKDKNRRKN-----KR 768
Query: 100 SGKDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
S ++E S+ N S+ S D A + K +K
Sbjct: 769 SSREEVSSDDNGSSDSDVDDRKEAKRRRKEEK 800
>At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 371
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
ERE+ E+ +K++ NKEAE+ T + + S E +D++ + + ++ +
Sbjct: 296 EREQEETEQKAK---NKEAEAGTSKSSGDAEQSSKEVNEEEEDDDDDDDDLDMDELDELE 352
Query: 37 AS 32
AS
Sbjct: 353 AS 354
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 181 EFEN-KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
E+E +E E + + KN+ +G+ KSSG E+ S++ + + +D D
Sbjct: 292 EYEREREQEETEQKAKNKEAEAGTS-KSSGDAEQSSKEVNEEEEDDDDD 339
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = -2
Query: 265 RNEEGKR--DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 92
+ EEGK D S ++ K E ++ E ++E ++K R + + E + S K
Sbjct: 433 QEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKKKEK-RKMETAEENEKSEK 491
Query: 91 DEEYSEQNSSNKSFNDGDASADYQTKSK 8
+ + + +DG ++ + KSK
Sbjct: 492 KKTKKSKAGGEEETDDGHSTKKKKKKSK 519
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENK---EAESSTYRD---KNRSVNSGSERKSS 98
E G+R+GS+ E+S K +E +K E + RD K+R + ER+S
Sbjct: 70 ERGEREGSRDREKHHHERSHEGSKEKESRSKRKDREEENGARDGKKKSRFADGNGERRSR 129
Query: 97 GKDEEYSEQN 68
+D +N
Sbjct: 130 FEDVAIEVEN 139
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNS--GSER--KSSGKDEE 83
+ G G +S+ ++ +E N+ A +S R++ NS GS+R KSS K+EE
Sbjct: 2 RTSGDVYGADTGSSRSDEDRGFKEDLNESA-TSPMRNRLDDSNSRPGSQRFVKSSRKEEE 60
Query: 82 YSEQNSSNKSFNDGDASADYQTKSK 8
+SS+K+ + Y K +
Sbjct: 61 TDSDSSSSKNTTTRNNPIQYTDKQQ 85
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 83
NE+ K DG S + +E S+K+ + E KE ++ + + +S ++ ++ G +++
Sbjct: 85 NEDKKGDGDAS---LPKEDESSSKQDNQEEKKEEKTK----EEFTPSSETKSETEGGEDQ 137
Query: 82 YSEQNSSNKSFNDGDASADYQTKS 11
+ S N D D D + S
Sbjct: 138 KDDSKSENGGGGDLDEKKDLKDNS 161
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKDEEYSEQNSSNKSFNDG 41
+ E ++N+K + E ++ E + + S + E+KS D++ S+ + NK+ N+
Sbjct: 162 DEENPDTNEKQTKPETEDNELGEDGENQKQFESDNGEKKSIDDDKKSSDDDKENKTGNE- 220
Query: 40 DASADYQTKSKK 5
D +TK++K
Sbjct: 221 ----DTETKTEK 228
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = -2
Query: 238 SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 59
++ + +E E + +++ KEA T D ++SV S RKS K+ E +++ SN
Sbjct: 363 TRKRLDLENEYIDHTEQNLPLNGKEA---TIEDDDKSVVS---RKSEEKEVEMNDETDSN 416
Query: 58 KSFNDGDASADYQTKSK 8
K D D+S +++S+
Sbjct: 417 KEECD-DSSCSEESESE 432
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = -2
Query: 265 RNEEG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSG 95
R +EG K++ K G E + E K+ E + +E E YRD + + N +E++ +
Sbjct: 364 RGDEGTEKQEIPKQGD--EEMEGEEEKQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENP 421
Query: 94 K--DEEYSEQNSSNKSFNDGD 38
K DEE + ++ + D
Sbjct: 422 KQGDEEMEREEGKEENVEEHD 442
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYR--DKNRSVNSGSERKSSGKDE 86
E K+ K VE EK E + S + + K+AE+ T + + +++K ++E
Sbjct: 453 EPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEE 512
Query: 85 EYSEQNSSNK 56
E +E + K
Sbjct: 513 ETTETPAKKK 522
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -2
Query: 208 KSESNKKSREFENK--EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 35
K+ + + S +NK EA DKN S + + ++EE SE+ + +DG+
Sbjct: 92 KATTEEPSSTEQNKAIEAVKEDKYDKNEEEKSEKDEQEKSEEEE-SEEEEKEEGNDDGEE 150
Query: 34 SADYQTKSKK 5
S++ T +++
Sbjct: 151 SSNDSTTTEE 160
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 202 ESNKKSREFENKEA--ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 29
E+ KK E E+K+A ES + N G + + K EE E + K + DA+
Sbjct: 364 EAEKKREEEESKDAPAESDAEEEAEDDDNEGDDSDNESKSEETKEAEET-KEAEETDAAH 422
Query: 28 D 26
D
Sbjct: 423 D 423
>At1g51745.1 68414.m05831 expressed protein
Length = 635
Score = 29.1 bits (62), Expect = 1.7
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -2
Query: 259 EEGKRDGSK--SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
E+ K SK SG RE + +N E E+ E N S S+R SGK++
Sbjct: 88 EKAKASSSKKRSGKCTLREDAINNALKIENEHLAKEDDNLC--NLSGEEDSKRCLSGKED 145
Query: 85 EYSEQNSSNKSFNDGDASADYQTKS 11
E S + + ++ +D ASA Q +S
Sbjct: 146 EDSGSSDAEETEDDELASAPEQLQS 170
>At1g32150.1 68414.m03955 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 389
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = -2
Query: 256 EGKRDGSKSGVTVEREKSESNKKSREF-ENKEAESSTYRDKN----RSVNSGSERKSSGK 92
+GK K + ++R K + +N EA ++ N +S SGS+ S G
Sbjct: 138 DGKPSDGKEKLPIKRSKGSLGSLNMIIGKNNEAGKNSGASANGACSKSAESGSDGSSDGS 197
Query: 91 DEEYSEQNSSNKSFNDGDASAD 26
D + S + DG+ +++
Sbjct: 198 DANSQNDSGSRHNGKDGETASE 219
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 80
+E D KS ER+K +S K + E E E K+ + + K KDE+
Sbjct: 170 KEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEI----KEKKKNKDEDV 225
Query: 79 SEQNSSNKSFNDGDASADYQTKSKK 5
++ K D S + + + KK
Sbjct: 226 VDEKEKEK-LEDEQRSGERKKEKKK 249
>At5g44690.1 68418.m05476 hypothetical protein
Length = 684
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNK-KSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
RNEE ++ + +E +S + S ++E + T R R SG E KSS D
Sbjct: 369 RNEERRKKEEGKSMEIEEYRSNPQEVTSVVCLDREKDEETARQVFRE--SGKEEKSSQND 426
Query: 88 EEYSE 74
EE S+
Sbjct: 427 EETSK 431
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
E+ K E +K R + K+ + R + + ++ GK E SE+ S + +
Sbjct: 32 EKAKKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGK-EVGSEKRSHKRRRKEDG 90
Query: 37 ASADYQTKSKK 5
A D K K+
Sbjct: 91 AKVDLFHKLKE 101
>At2g19870.1 68415.m02323 tRNA/rRNA methyltransferase (SpoU) family
protein similar to SP|P25270 Ribose methyltransferase
PET56 (EC 2.1.1.-) {Saccharomyces cerevisiae}; contains
Pfam profile PF00588: SpoU rRNA Methylase (RNA
methyltransferase, TrmH) family
Length = 589
Score = 28.7 bits (61), Expect = 2.2
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = -2
Query: 253 GKRDGSKSGVTVEREKSESN--------KKSREFENKEAESSTYRDKNRSVNSGSERKSS 98
G+RD S V E +K N K ++E + S++ D+ R+ NS S R
Sbjct: 174 GRRDDRISEVEEESKKGGGNSIWVANDDKPAKEQSPRVNNRSSWDDRTRNQNSFSARGDD 233
Query: 97 GKDEEYSEQNSSNKSFNDGD 38
EE +E+ + N + DGD
Sbjct: 234 RITEE-AEEETMNHAPEDGD 252
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSER---KSSGKDEEYSEQNSSNKSFND 44
+E S S + + E++ +E + V S +E+ K KDEE E+N + K+
Sbjct: 4545 KEYSVSEDEEEDKEDEGSEDEPLDNGIGDVGSDAEKADEKPWNKDEEDEEENMNEKN-ES 4603
Query: 43 GDASADYQTKSKKV 2
G + D T+S+++
Sbjct: 4604 GPSIVDKDTRSREL 4617
>At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing
protein
Length = 573
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = -2
Query: 253 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE---- 86
G+ GS+ G + + + K SR+ E ++T RD S NSG R S ++E
Sbjct: 470 GEEGGSEYGGYEDETQEKEEKPSRDKER----ATTERDW--SENSGDRRHKSHREEKDSH 523
Query: 85 -EYSEQ-NSSNKSFNDGDASADYQTKSK 8
EY +Q + + F+ G +S +++S+
Sbjct: 524 REYKQQRDRDSDEFDRGQSSLKSRSRSR 551
>At5g65490.1 68418.m08236 expressed protein similar to unknown
protein (dbj BAA75199.1)
Length = 643
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSV---NSGSERKSSGKD--EEYSEQNSSNKSF 50
+E S+ S ++ ++ +S +++ + + NS ERK+ GK+ E S +++ +F
Sbjct: 398 QEVPASDNDSWLYDGEDELNSVLQERQKEMEFYNSKKERKNKGKEKQEAGSSSDANMNNF 457
Query: 49 NDGDASADYQTKSKKV 2
+ GD S Q KV
Sbjct: 458 DLGDISKSMQQFMHKV 473
>At5g50840.2 68418.m06299 expressed protein
Length = 405
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = -2
Query: 256 EGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 77
E KR GSK+ E+E E K ++ ++ + T RDK S+ +R++ EE
Sbjct: 125 ESKRKGSKNMFKSEKEFLEFMLKYQQVLSERDSAITVRDKLESLCRELQRQNKMLMEECK 184
Query: 76 EQNSSNKSFNDGDASADYQ 20
++ ++ D S +Q
Sbjct: 185 RVSTEGQTLR-SDLSTKFQ 202
>At5g50840.1 68418.m06298 expressed protein
Length = 404
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = -2
Query: 256 EGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 77
E KR GSK+ E+E E K ++ ++ + T RDK S+ +R++ EE
Sbjct: 124 ESKRKGSKNMFKSEKEFLEFMLKYQQVLSERDSAITVRDKLESLCRELQRQNKMLMEECK 183
Query: 76 EQNSSNKSFNDGDASADYQ 20
++ ++ D S +Q
Sbjct: 184 RVSTEGQTLR-SDLSTKFQ 201
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 53
E+E+ ++KK +E E +S D N + E+ K E S +S + S
Sbjct: 418 EKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGS 472
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 250 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 101
KR + T ++S+SN + + E + + S +SGSER+S
Sbjct: 427 KRQEQEETATDSDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGSERRS 476
>At5g12230.1 68418.m01435 expressed protein
Length = 221
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/71 (18%), Positives = 38/71 (53%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
+R+K + +++ ++ ++K + S +DK++ + ++ ++S+++ K +DGD
Sbjct: 134 DRDK-DKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSGDHSKKHHDKKRKHDGD 192
Query: 37 ASADYQTKSKK 5
+ + KK
Sbjct: 193 EDLNDVQRHKK 203
>At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 852
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Frame = -2
Query: 238 SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS------ERKSSGKDEEYS 77
S+ ++ +E SE + N ++ + D S S S + SSG+ ++S
Sbjct: 118 SQGKLSTHKEVSEDESSQQLSVNSVSDRTDGLDIRLSPGSQSLADFRQDDTSSGQTPQHS 177
Query: 76 EQNSSNKSFNDGDASADYQTKSKKV 2
NSSN N D S ++ S V
Sbjct: 178 RSNSSNGEVNTADESGNFSELSDDV 202
>At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 861
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Frame = -2
Query: 238 SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS------ERKSSGKDEEYS 77
S+ ++ +E SE + N ++ + D S S S + SSG+ ++S
Sbjct: 118 SQGKLSTHKEVSEDESSQQLSVNSVSDRTDGLDIRLSPGSQSLADFRQDDTSSGQTPQHS 177
Query: 76 EQNSSNKSFNDGDASADYQTKSKKV 2
NSSN N D S ++ S V
Sbjct: 178 RSNSSNGEVNTADESGNFSELSDDV 202
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -2
Query: 235 KSGVTVERE----KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 68
K +T+E++ + E +K E E KE + S R+K + K GK+++ E +
Sbjct: 520 KEIITLEKQVKLLEEEEKEKREEEERKEKKRSKEREKKLRKKERLKEKDKGKEKKNPECS 579
Query: 67 SSNKSFNDGDASAD 26
+ N D
Sbjct: 580 DKDMLLNSSREEED 593
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q27974
Auxilin {Bos taurus}; contains Pfam profile PF00226:
DnaJ domain
Length = 1448
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 271 IIRNEEGKRDGSKSGVTV-EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 95
++++EE +G+ V E E + ++ E+K +E + ++ + +ER S
Sbjct: 530 MVQDEESDSQEMLAGIPVIETYLREVEETPQQTESK-SEMNIEEKSESTICAFTERSSQN 588
Query: 94 KDEEYSEQNSSNKSFNDGDASADYQ 20
++E Q S F DG D+Q
Sbjct: 589 MEKETGWQVKSACKFEDGSGVKDFQ 613
>At1g70505.1 68414.m08114 expressed protein
Length = 338
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 241 GSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 83
G S V++ R +S N ++R + E TYR + NS + SSG D E
Sbjct: 148 GLGSLVSIYRFRSPDNGENR-VSIVDEEQGTYRPPGNAENSNVFKSSSGHDRE 199
>At1g21390.1 68414.m02676 expressed protein
Length = 248
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 190 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 77
+ +E+ N+ +ESST R + S N+ +SS +DE+ S
Sbjct: 185 EDKEWWNRMSESSTKRSGSSSSNNSIRSRSSLRDEKSS 222
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENK----EAESSTYRDKNRSVNSGSERKS 101
I +E + + S V +++ ++ + E +++ E ES T DK V E+K
Sbjct: 27 ISGKEVQENASGKEVQESKKEEDTGLEKMEIDDEGKQHEGESET-GDKEVEVTE-EEKKD 84
Query: 100 SGKDEEYSEQNSSNKSFNDGDASAD 26
G+D+E E + ++ +D + AD
Sbjct: 85 VGEDKEQPEADKMDEDTDDKNLKAD 109
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = -2
Query: 289 RDRNQ*IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 110
+D N+ +E +++ S E+E+S + K E KE + DK + S
Sbjct: 243 KDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDE---KEESNDDKEDKKEDIKK-SN 298
Query: 109 RKSSGKDEEYSEQNSSNKSFND 44
++ GK E+ + S++ D
Sbjct: 299 KRGKGKTEKTRGKTKSDEEKKD 320
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = -2
Query: 265 RNEEGKRD-GSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
+ EG+ + G K E EK + + + E + + T DKN + G ++ +D
Sbjct: 62 KQHEGESETGDKEVEVTEEEKKDVGEDKEQPEADKMDEDT-DDKNLKADDGVSGVATEED 120
Query: 88 EEYSE--QNSSNKSFNDGDASADYQTKSKKV 2
E +++ NK + + + ++K +K+
Sbjct: 121 AVMKESVESADNKDAENPEGEQEKESKEEKL 151
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/83 (22%), Positives = 33/83 (39%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R + R+GS+ + +RE+S + + + R+K S S E K E
Sbjct: 88 RERDKVREGSRDKES-DRERSSKERDRSDRDKPRDRERREREKRSSSRSRREEKEPEVVE 146
Query: 85 EYSEQNSSNKSFNDGDASADYQT 17
S ++ K + D D +T
Sbjct: 147 RGSRRHRDKKDEPEADPERDQRT 169
Score = 26.6 bits (56), Expect = 9.0
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER-KSSGKDE 86
N GKRD + R+K K RE +++ ES R+++ S+R K ++
Sbjct: 68 NGGGKRDRERERHRSSRDKDRERDKVRE-GSRDKESD--RERSSKERDRSDRDKPRDRER 124
Query: 85 EYSEQNSSNKS 53
E+ SS++S
Sbjct: 125 REREKRSSSRS 135
>At4g12610.1 68417.m01987 transcription initiation factor IIF alpha
subunit (TFIIF-alpha) family protein low similarity to
SP|Q05913 Transcription initiation factor IIF, alpha
subunit (TFIIF-alpha) (Transcription factor 5, large
chain) (TF5A) {Drosophila melanogaster}; contains Pfam
profile PF05793: Transcription initiation factor IIF,
alpha subunit (TFIIF-alpha)
Length = 543
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
NEE + SKSG +++ ++N E+ + +S + N + S++K + K+E
Sbjct: 330 NEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGTVTNSKQKEAAKEE 388
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = -2
Query: 268 IRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 89
I ++ +D K G++ E+ E + S EFE + ++ + V ERK+
Sbjct: 440 IEAQKRAKDEIKMGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQNS 499
Query: 88 EEYSEQNSSNK 56
E E K
Sbjct: 500 ERGFESKIEQK 510
>At1g74830.1 68414.m08670 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 542
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 205 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
SE K+ E + EAE YR+K + + + EE+ +QN + +++D
Sbjct: 378 SELAKREEEMKELEAEFEVYREKYGCLTDQEDAR-----EEFHKQNGNASAYDD 426
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 27.9 bits (59), Expect = 3.9
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRD-KNRSVNSGSERKSSGKD 89
R G S +G + R S K +R+ ++K S RD ++ VN E KS ++
Sbjct: 735 RASSGSSASSSNGSSA-RTVPHSRKHNRKLQSKNVASKVSRDVEDERVNFKVENKSRKEE 793
Query: 88 EEYS---------EQNSSNKSFNDG 41
E+ S EQN SN G
Sbjct: 794 EDTSGETKGAVRLEQNESNSKETPG 818
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/78 (20%), Positives = 31/78 (39%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 80
E+G +G E + KK + + K+ + +DK+ ++KS G D++
Sbjct: 52 EKGGEKVDGAGSDDEDNDKKEKKKEHDVQKKDKQHEN-KDKDDEKKHVDKKKSGGHDKDD 110
Query: 79 SEQNSSNKSFNDGDASAD 26
++ DG D
Sbjct: 111 DDEKKHKDKKKDGHNDDD 128
>At5g05050.1 68418.m00536 peptidase C1A papain family protein weak
similarity to berghepain-2 [Plasmodium berghei]
GI:17978639; contains Pfam profile PF00112: Papain
family cysteine protease
Length = 299
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -2
Query: 253 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 74
G+ G+KS E + K + SS+ KN+S S ++ + +DEE+++
Sbjct: 30 GRNGGNKSDSDEESAVVGVGAGRKGKNKKSSSSSSSSKKNKSPAKASTKRFTKEDEEWAK 89
Query: 73 QNSSNKSFNDGD 38
S+ + N D
Sbjct: 90 DLPSDFTTNCKD 101
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/54 (18%), Positives = 25/54 (46%)
Frame = -2
Query: 205 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
+++N + N + + +D N + N+ + ++G D + N +N N+
Sbjct: 82 NDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNN 135
>At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: LUC7 N_terminus
Length = 402
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = -2
Query: 211 EKSESNK-KSREFENKEAESSTYRDK----NRSVNSGSERKSSGKDEEYSEQNSSNKSFN 47
EK+ K +S+E +KE ESS R+K +R +R+S +D + ++ ++
Sbjct: 311 EKANIRKERSKERNSKERESSKDREKEQETSREHRRDYDRRSRDRDRHHDRDREQDRDYD 370
Query: 46 DGDASADYQTKSK 8
+ + +++S+
Sbjct: 371 RSHSRSRRRSRSR 383
>At2g32250.2 68415.m03942 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 805
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 244 DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
+ S SG + + +FE+KEA YR+ RSV G K+S + +
Sbjct: 22 EASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSK 74
>At2g32250.1 68415.m03941 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 807
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 244 DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
+ S SG + + +FE+KEA YR+ RSV G K+S + +
Sbjct: 22 EASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSK 74
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Frame = -2
Query: 259 EEGKRDGSKS--GVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
E R SK G E+EK E + R EN + + + S+RKS +
Sbjct: 779 ERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRR 838
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSKK 5
S ++ +S + SK+
Sbjct: 839 SVSPSPVRSRRKRSSPSSDESSDDSKR 865
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 897
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Frame = -2
Query: 259 EEGKRDGSKS--GVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
E R SK G E+EK E + R EN + + + S+RKS +
Sbjct: 749 ERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRR 808
Query: 85 EYSEQNSSNKSFNDGDASADYQTKSKK 5
S ++ +S + SK+
Sbjct: 809 SVSPSPVRSRRKRSSPSSDESSDDSKR 835
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 160 ESSTYRDKNRSVNSGSERKSSGKDEEYSE 74
++ + R+ RS + GSER+ GK++E+ E
Sbjct: 288 QARSSREGYRSGSVGSERRGKGKEKEFGE 316
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQNSSNKSFNDGD 38
+++S + S + E K ++ RDKN S++ RK D ++ S +DG+
Sbjct: 825 KKQSSGEEDSEQSEGKTSDVDA-RDKNGSLDDSKVRKGIEADSSPRTKDTRSENGHDDGE 883
Query: 37 ASA 29
++A
Sbjct: 884 STA 886
>At5g66950.1 68418.m08440 expressed protein
Length = 870
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
REKS+ N R N++ S R RSV+ G S DE+ E S+ ++D
Sbjct: 631 REKSQYNG-GRLLVNEDEHPSKRRVSFRSVDHGEASVISLGDEDEEEDGSNGVEWDD 686
>At5g59730.1 68418.m07487 exocyst subunit EXO70 family protein
leucine zipper-containing protein, Lycopersicon
esculentum, PIR:S21495 contains Pfam domain PF03081:
Exo70 exocyst complex subunit;
Length = 634
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 220 VEREKSESNKKSREFENKEAES-STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 44
+E E K +RE+ + E S +YR S ++ + S + Y E F+
Sbjct: 102 LESEFHRVLKANREYLDPECVSVRSYRSSRFSTSTTTSVSDSEDESSYEENADEEHRFSG 161
Query: 43 GDASA 29
GD+ A
Sbjct: 162 GDSDA 166
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 187 SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE--QNSSNKSFNDGD 38
SRE ++ ++ S R++ S N G R+ S SE NSS S N +
Sbjct: 186 SRERDDSKSNRSGSRERGSSGNGGGSRRVSRSPGRRSEINPNSSGNSVNSSN 237
>At5g15430.1 68418.m01806 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 478
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 312 KDTDDKYSETGTNKSSETKKASVMARRAASQSKG 211
+ T + G +K++E KKA + RRA+ SKG
Sbjct: 193 RSTVKRKKMNGGSKAAEQKKAVMALRRASMSSKG 226
>At4g37210.2 68417.m05267 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 377
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 35
+++ E ++S E+ A S D R +S + S GKD+ ++ + +D D
Sbjct: 148 KKEGEVQQESSNGESL-APSVVSGDPERQGSSSGQEGSGGKDQGEDGEDCQDDDLSDADG 206
Query: 34 SAD 26
AD
Sbjct: 207 DAD 209
>At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 492
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 35
+++ E ++S E+ A S D R +S + S GKD+ ++ + +D D
Sbjct: 148 KKEGEVQQESSNGESL-APSVVSGDPERQGSSSGQEGSGGKDQGEDGEDCQDDDLSDADG 206
Query: 34 SAD 26
AD
Sbjct: 207 DAD 209
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 27.1 bits (57), Expect = 6.8
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = -2
Query: 265 RNEEG--KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSG 95
R +EG K++ K G E + E K+ E + +E E YRD + + N +E++ +
Sbjct: 445 RGDEGTEKQEIPKQGN--EEMEVEEEKQEEEGKEEEQEKVEYRDHHSTCNVEETEKQENP 502
Query: 94 K--DEEYSEQNSSNKSFNDGDASAD 26
K DEE + + D D
Sbjct: 503 KQGDEEMEREEGKEEKVEKHDEYND 527
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 196 NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 50
N+++ ++ N +Y ++ V +G+E S D E N NKS+
Sbjct: 461 NEEAGDYLNHHISFGSYNIEDGEVENGNEEGSGESDLHSIELNIDNKSY 509
>At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 566
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -2
Query: 241 GSKSGVTVEREKSESNK--KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 83
G G E + E +K +S F N AE T++D + V R G DE+
Sbjct: 85 GWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDED 139
>At2g35210.1 68415.m04319 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 395
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 202 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 38
E+++ ++F N ++ SS N + ++ E KSS K S SS F DGD
Sbjct: 294 ETDEARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGD 348
>At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate synthase,
UDP-forming, putative / trehalose-6-phosphate synthase,
putative / UDP-glucose-glucosephosphate
glucosyltransferase, putative similar to
trehalose-6-phosphate synthase SL-TPS/P [Selaginella
lepidophylla] GI:4100325; contains Pfam profiles
PF00982: Glycosyltransferase family 20, PF02358:
Trehalose-phosphatase
Length = 942
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -2
Query: 271 IIRNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG--SERKS 101
I R+ G+KS R S+S + + +K + SS + N+S SERKS
Sbjct: 819 IARSRPSSDSGAKSSSGDRRPPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKS 877
>At1g76770.1 68414.m08934 heat shock protein-related contains
similarity to 17.9 kDa heat-shock protein [Helianthus
annuus] gi|11990130|emb|CAB55634
Length = 244
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -2
Query: 235 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 56
K+ E E+ + E EN+EAE ++ V G+ R GK EE E K
Sbjct: 154 KTEEKTEPEEEIKEETKPEEENEEAEEPQREEEEEVVEEGT-RDHEGKKEEEIEDKPRKK 212
>At1g63420.1 68414.m07172 expressed protein
Length = 578
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 199 SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 62
S KKS E + S++ ++NRS S S SG ++ +E N S
Sbjct: 125 SEKKSPEETGSSVDCSSFLNQNRS-GSCSRTLQSGYNQNQTESNRS 169
>At1g22882.1 68414.m02857 expressed protein
Length = 660
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = -2
Query: 211 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 53
+KSE N + + + + + +++ +G+ + D E+ EQN NK+
Sbjct: 154 KKSEINNTGTWNDTEGKDDNNFLKQSQLNKTGTGNDTESSDNEFLEQNQMNKT 206
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = -2
Query: 262 NEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS-VNSGSERKSS-GKD 89
N + DG K+G + ++EK+++ + AE+ + + V+S +++K+S G
Sbjct: 457 NVKKHEDGIKTGKSSKKEKADNGLAKTSAKKPLAETMMVKPSGKKLVHSDAKKKNSEGAS 516
Query: 88 EEYSEQNSSNKSFNDGDASADYQTKSKK 5
+ SS D A+ KS++
Sbjct: 517 MDTPIPQSSKSKKKDSRATTPATKKSEQ 544
>At1g07980.1 68414.m00869 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam profile PF00808:
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to Chromatin accessibility
complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA
polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo
sapiens}
Length = 206
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/77 (19%), Positives = 33/77 (42%)
Frame = -2
Query: 265 RNEEGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 86
R+ + + + V + ++K E + S + E + D+ + N ++ +GK
Sbjct: 27 RSSGSRTKKTSNKVNIVKKKPEIYEISESSSSDSVEEAIRGDEAKKSNGVVSKRGNGKSV 86
Query: 85 EYSEQNSSNKSFNDGDA 35
+ S N+ +DG A
Sbjct: 87 GIPTKTSKNREEDDGGA 103
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = -2
Query: 259 EEGKRDGSKSGVTVEREKSESN---KKSREFENKEAESSTYRDKNRSVNS--GSERKSSG 95
++ K+ G G TV+++K+ K ++ +R ++ V S+ K
Sbjct: 128 DQHKQHGHGKGKTVKKQKTAQVFQCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEE 187
Query: 94 KDEEYSEQNSSNKSFNDGDASADYQTKS 11
++EEY E + N D D D + KS
Sbjct: 188 EEEEYKEDDDDND--EDEDEEEDEEDKS 213
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF---N 47
+ + E + E ++ E S ++NR + +S+ DEEY + +KS+ N
Sbjct: 541 DEDDEEGDDDFHEPDSDEDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKSYWTDN 600
Query: 46 DGDASAD 26
+ + S D
Sbjct: 601 EEEESRD 607
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 217 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF---N 47
+ + E + E ++ E S ++NR + +S+ DEEY + +KS+ N
Sbjct: 560 DEDDEEGDDDFHEPDSDEDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKSYWTDN 619
Query: 46 DGDASAD 26
+ + S D
Sbjct: 620 EEEESRD 626
>At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 360
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -2
Query: 253 GKRDGSKSGVTVEREKSESNKKSREFENKEAES--STYRDKNRSVNSGSERKSSGKDEEY 80
G D + ++E K S E K+ S + +R + R + +DEEY
Sbjct: 228 GSEDEDDDDEEDDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAMDEDEEY 287
Query: 79 SEQNSSNKSFNDGDA 35
E + +GD+
Sbjct: 288 EEDEEDENNEEEGDS 302
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 220 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 68
+ERE + N +S E E+ E+E D + + G E++ G E EQ+
Sbjct: 348 LEREDNVDNSESDEDEDSESEEE--EDDDGESDGGDEKQRKGHHLEDWEQS 396
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = -2
Query: 214 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 35
+E+ +N K+ E N + S+ + + E K E Y + +N+ FN+ +
Sbjct: 98 KEEFNNNNKNDEKVNSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNN 157
Query: 34 SADYQTKSK 8
D K +
Sbjct: 158 KYDANFKEE 166
>At1g26680.1 68414.m03250 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 920
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 127 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD-YQTKSKK 5
VNS S SSG D SE+ S ++ D + S D +TK +K
Sbjct: 841 VNSLSSNPSSGDDSSRSEE-SEEENMEDKNISQDCLETKKRK 881
>At1g13350.1 68414.m01550 protein kinase family protein contains
protein kinase domain, Pfam:PF00069 (likely that this
cDNA contains a single unspliced intron. Putative intron
removed in this gene model.)
Length = 761
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = -2
Query: 292 FRDRNQ*IIRNEEGKRDGSK-SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 116
FR+ N + RN+ +R+ K + +RE+ + + E RD++
Sbjct: 98 FRENN--LGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRS 155
Query: 115 SERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKK 5
++ E E +S D D ++Q+ +K
Sbjct: 156 RDKARYSSRERGRENERERRSEKDRDKGREFQSDREK 192
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,939,239
Number of Sequences: 28952
Number of extensions: 114306
Number of successful extensions: 1080
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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