Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0622.Seq
         (488 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341217-1|AAR13781.1|  200|Anopheles gambiae SRPN10 protein.          23   5.6  
AY341216-1|AAR13780.1|  200|Anopheles gambiae SRPN10 protein.          23   5.6  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   7.4  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    22   9.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   9.8  

>AY341217-1|AAR13781.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -3

Query: 159 IKEDPDISNHFNKPRTQCGNGSWKTKRDFI 70
           +   P+I+NH ++P+    + S      F+
Sbjct: 29  LSTQPEITNHLDRPKVTMADNSSSLDAQFV 58


>AY341216-1|AAR13780.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -3

Query: 159 IKEDPDISNHFNKPRTQCGNGSWKTKRDFI 70
           +   P+I+NH ++P+    + S      F+
Sbjct: 29  LSTQPEITNHLDRPKVTMADNSSSLDAQFV 58


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 341 KKLTQIYRHASQAIRTYILREINRKDKTCFISDPTHMKSL 460
           KK+T  + +  Q IR     E  R+DK     D  H + L
Sbjct: 117 KKMTSTWENTVQNIRDKKEAERLRRDKAKVEEDQRHYREL 156


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 354 KYIDMRHKQLGPIFYERLTGKTKLALSATQLT 449
           K + +  + L P FY +  GKT + L    LT
Sbjct: 6   KLLALLQRPLEPTFYPKDDGKTVVDLPENYLT 37


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 156 KEDPDISNHFNKPRTQCGNGSWKTKR 79
           + DP I    N+  T C    WKTK+
Sbjct: 230 RRDPPI----NRQHTPCAGRRWKTKQ 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,147
Number of Sequences: 2352
Number of extensions: 9125
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)