Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0621.Seq
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   7.1  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   9.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 303 GNIVLASFELPESNIDLIP 247
           GNI +  + +P  NI+ +P
Sbjct: 151 GNIAMELWNMPRENIEPLP 169


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 324 QRFHQEHDHRNLS 362
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 4/11 (36%), Positives = 7/11 (63%)
 Frame = -1

Query: 137 HHICRSSDQWW 105
           HH+ ++   WW
Sbjct: 88  HHLIKNKPNWW 98


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 401 PVPXXTMSTAQSA 363
           P+P  T STA SA
Sbjct: 201 PIPQRTASTASSA 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,360
Number of Sequences: 336
Number of extensions: 1676
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)